Sequence Description Alias PCC hrr Cpa|evm.model.tig00020603.30 Probable plastid-lipid-associated protein 4, chloroplastic OS=Arabidopsis thaliana 0.9586082571158803 1 Cpa|evm.model.tig00000169.34 Peptide methionine sulfoxide reductase B5 OS=Arabidopsis thaliana 0.9576589127120633 2 Cpa|evm.model.tig00000350.14 0.9302958349508028 4 Cpa|evm.model.tig00001085.21 Presequence protease 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana 0.928064216474875 22 Cpa|evm.model.tig00020961.57 Thylakoid lumenal 15 kDa protein 1, chloroplastic OS=Arabidopsis thaliana 0.9266605393434455 5 Cpa|evm.model.tig00000796.24 0.9261223254627662 7 Cpa|evm.model.tig00020734.51 15-cis-phytoene desaturase, chloroplastic/chromoplastic OS=Capsicum annuum 0.9259966874674502 24 Cpa|evm.model.tig00020964.16 Peptide methionine sulfoxide reductase OS=Lactuca sativa 0.9247379977891184 8 Cpa|evm.model.tig00001374.9 0.9232920996288698 9 Cpa|evm.model.tig00000912.32 Protein degradation.peptidase families.serine-type peptidase activities.LON protease 0.9130722866754971 25 Cpa|evm.model.tig00020961.127 0.9119226811472695 11 Cpa|evm.model.tig00020911.37 0.9113624233253924 12 Cpa|evm.model.tig00021179.43 0.9081688051529537 13 Cpa|evm.model.tig00000949.8 0.9068288632427304 14 Cpa|evm.model.tig00021105.31 Photosynthesis.photophosphorylation.photosystem II.photoprotection.non-photochemical quenching (NPQ).FLAP1 NPQ-regulator protein 0.9066783539699151 15 Cpa|evm.model.tig00000215.61 0.9034155189874818 16 Cpa|evm.model.tig00020927.16 0.9008501363033536 17 Cpa|evm.model.tig00001215.19 0.9002140371783622 54 Cpa|evm.model.tig00000492.83 0.8998003664603874 64 Cpa|evm.model.tig00001094.34 Dihydrolipoyl dehydrogenase 1, mitochondrial OS=Arabidopsis thaliana 0.8982536402816965 20 Cpa|evm.model.tig00000367.31 0.8958883712161537 33 Cpa|evm.model.tig00021434.28 0.8910397130099276 22 Cpa|evm.model.tig00020553.74 0.890982390372937 23 Cpa|evm.model.tig00001085.20 Presequence protease 1, chloroplastic/mitochondrial OS=Arabidopsis thaliana 0.8896640028537679 26 Cpa|evm.model.tig00000691.29 0.8890117580021336 28 Cpa|evm.model.tig00000204.30 0.8890063289003524 26 Cpa|evm.model.tig00020563.171 Protein degradation.peptidase families.metallopeptidase activities.M48 families.PGM48 zinc metalloprotease 0.8879942171783142 27 Cpa|evm.model.tig00000525.2 Chaperone protein dnaJ C76, chloroplastic OS=Arabidopsis thaliana 0.8867136549385716 31 Cpa|evm.model.tig00000551.6 0.8866945683802332 68 Cpa|evm.model.tig00000215.47 ATPase family AAA domain-containing protein FIGL1 OS=Arabidopsis thaliana 0.8865809065320001 30 Cpa|evm.model.tig00020675.39 0.8835323030043073 31 Cpa|evm.model.tig00000254.94 0.8829138244516134 92 Cpa|evm.model.tig00000367.32 0.8826601182727308 33 Cpa|evm.model.tig00021374.32 0.8816048495100477 34 Cpa|evm.model.tig00021493.51 Uncharacterized protein At2g34460, chloroplastic OS=Arabidopsis thaliana 0.8808742868514543 35 Cpa|evm.model.tig00000640.27 0.8807008442506403 36 Cpa|evm.model.tig00021441.9 0.8801978377233964 73 Cpa|evm.model.tig00000402.46 0.8757923015149968 64 Cpa|evm.model.tig00021489.1 0.8752630766226988 40 Cpa|evm.model.tig00020941.49 Flagellar radial spoke protein 5 OS=Chlamydomonas reinhardtii 0.8751379422347035 41 Cpa|evm.model.tig00020710.33 0.8744447797286485 42 Cpa|evm.model.tig00021616.13 0.8727215689785318 97 Cpa|evm.model.tig00021682.6 0.8715017656975823 45 Cpa|evm.model.tig00020723.64 0.8708900259717114 93 Cpa|evm.model.tig00021257.23 0.8678587103253078 50 Cpa|evm.model.tig00000692.71 0.865906503203167 51 Cpa|evm.model.tig00000823.29 DCC family protein At1g52590, chloroplastic OS=Arabidopsis thaliana 0.8655522846005937 55 Cpa|evm.model.tig00021181.12 Coenzyme metabolism.iron-sulfur cluster assembly machineries.plastidial SUF system.transfer phase.SUF-A component 0.8631878001733874 53 Cpa|evm.model.tig00000178.17 Redox homeostasis.hydrogen peroxide removal.glutathione peroxidase 0.8607131408877962 55 Cpa|evm.model.tig00020830.39 5-amino-6-(5-phospho-D-ribitylamino)uracil phosphatase, chloroplastic OS=Arabidopsis thaliana 0.8602530721643452 70 Cpa|evm.model.tig00021038.81 Protein DAMAGED DNA-BINDING 2 OS=Arabidopsis thaliana 0.8570541840459004 58 Cpa|evm.model.tig00000361.40 0.856297838492903 60 Cpa|evm.model.tig00000025.11 0.8544162817217092 62 Cpa|evm.model.tig00020807.17 Enzyme classification.EC_1 oxidoreductases.EC_1.3 oxidoreductase acting on CH-CH group of donor(50.1.3 : 216.1) & NADPH-dependent oxidoreductase 2-alkenal reductase OS=Arabidopsis thaliana 0.8524490757128784 64 Cpa|evm.model.tig00021612.37 Enzyme classification.EC_1 oxidoreductases.EC_1.3 oxidoreductase acting on CH-CH group of donor(50.1.3 : 248.1) & Enoyl-[acyl-carrier-protein] reductase, mitochondrial OS=Arabidopsis thaliana 0.8505125032276154 67 Cpa|evm.model.tig00000197.12 0.8496919148396905 77 Cpa|evm.model.tig00000254.78 Enzyme classification.EC_1 oxidoreductases.EC_1.8 oxidoreductase acting on sulfur group of donor(50.1.8 : 227.9) & Glutathione reductase, chloroplastic/mitochondrial OS=Pisum sativum 0.8481153359946545 72 Cpa|evm.model.tig00001331.8 0.8475814192801713 73 Cpa|evm.model.tig00000215.56 Pyridoxal reductase, chloroplastic OS=Arabidopsis thaliana 0.8461023812058229 75 Cpa|evm.model.tig00020911.11 Uncharacterized protein At5g02240 OS=Arabidopsis thaliana 0.8459524919039575 75 Cpa|evm.model.tig00000615.34 Cell cycle.organelle machineries.organelle fission.plastid division.GC1/SulA regulator protein 0.8452869689901541 76 Cpa|evm.model.tig00020961.112 Cellular respiration.oxidative phosphorylation.NADH dehydrogenase complex.non-core components.beta subcomplex.NDUFB8 component 0.8442553091069427 78 Cpa|evm.model.tig00021494.27 0.8430645785997483 79 Cpa|evm.model.tig00000344.14 0.8428435997395672 93 Cpa|evm.model.tig00000042.5 Secondary metabolism.terpenoids.terpenoid synthesis.cycloartenol synthesis.squalene epoxidase 0.8424587339354427 81 Cpa|evm.model.tig00000169.17 External stimuli response.temperature.Csd (cold-shock-domain) protein 0.8417659010264972 82 Cpa|evm.model.tig00000057.85 Coenzyme metabolism.iron-sulfur cluster assembly machineries.plastidial SUF system.transfer phase.IBA57 component 0.8411047756009304 92 Cpa|evm.model.tig00000144.61 Protein modification.peptide maturation.plastid.EGY protease 0.8409776636925836 84 Cpa|evm.model.tig00021435.52 0.8407214501256229 85 Cpa|evm.model.tig00020816.56 0.839577761452364 87 Cpa|evm.model.tig00000158.15 0.8389092696452414 89 Cpa|evm.model.tig00020801.99 0.8366217544138482 93 Cpa|evm.model.tig00000691.26 External stimuli response.temperature.Hsp (heat-shock-responsive protein) families.Hsp60 family.Hsp10 Hsp60-co-chaperone 0.8361113605326477 94 Cpa|evm.model.tig00020830.54 0.8303886549780684 98 Cpa|evm.model.tig00000980.28 Redox homeostasis.low-molecular-weight scavengers.tocopherol biosynthesis.gamma-tocopherol methyltransferase (VTE4/TMT) 0.8299766376526017 99