Sequence Description Alias PCC hrr AT3G14420 Aldolase-type TIM barrel family protein 0.9339095969795845 1 AT4G03280 photosynthetic electron transfer C PGR1, PETC 0.9084032675677979 7 AT4G37930 serine transhydroxymethyltransferase 1 STM, SHM1, SHMT1 0.9044594789733809 10 AT3G54050 high cyclic electron flow 1 HCEF1 0.8967364226145276 23 AT1G42970 glyceraldehyde-3-phosphate dehydrogenase B subunit GAPB 0.8963588966498567 22 AT3G63140 chloroplast stem-loop binding protein of 41 kDa CSP41A 0.8949517698834141 14 AT5G66190 ferredoxin-NADP(+)-oxidoreductase 1 FNR1, ATLFNR1 0.8945371106709743 20 AT1G68010 hydroxypyruvate reductase HPR, ATHPR1 0.8944841296639222 8 AT3G14415 Aldolase-type TIM barrel family protein 0.8924558501360365 9 AT4G22890 PGR5-LIKE A PGR5-LIKE A 0.8921205072331636 10 AT5G03880 Thioredoxin family protein 0.8893538075151762 11 AT1G09340 chloroplast RNA binding CRB, HIP1.3, CSP41B 0.8887622213625088 25 AT1G71500 Rieske (2Fe-2S) domain-containing protein 0.8881618768865726 13 AT1G32060 phosphoribulokinase PRK 0.8868982390223765 14 AT2G39730 rubisco activase RCA 0.8857797233304167 15 AT2G39470 PsbP-like protein 2 PPL2 0.8836721576155068 28 AT1G45474 photosystem I light harvesting complex gene 5 LHCA5 0.8774585174205658 26 AT1G15980 NDH-dependent cyclic electron flow 1 NDH48, NDF1 0.874514888052991 30 AT5G35630 glutamine synthetase 2 GS2, ATGSL1, GLN2 0.8717864662441632 19 AT5G43750 NAD(P)H dehydrogenase 18 NDH18 0.8711352910420564 55 AT5G36790 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 0.870670091061391 30 AT5G36700 2-phosphoglycolate phosphatase 1 PGLP1, ATPGLP1 0.870670091061391 30 AT1G65230 Uncharacterized conserved protein (DUF2358) 0.8695305461609588 23 AT2G46820 photosystem I P subunit PTAC8, TMP14, PSI-P, PSAP 0.8663130580130034 26 AT2G21330 fructose-bisphosphate aldolase 1 FBA1 0.8662110696888976 25 AT1G20340 Cupredoxin superfamily protein DRT112, PETE2 0.8635764767860873 26 AT3G12780 phosphoglycerate kinase 1 PGK1 0.863266966815975 34 AT3G10060 FKBP-like peptidyl-prolyl cis-trans isomerase family protein 0.8611595831398148 28 AT3G55800 sedoheptulose-bisphosphatase SBPASE 0.8608261423778 52 AT4G38970 fructose-bisphosphate aldolase 2 FBA2 0.858826544893855 30 AT1G06680 photosystem II subunit P-1 OE23, OEE2, PSBP-1, PSII-P 0.8583428681221413 31 AT4G09350 Chaperone DnaJ-domain superfamily protein 0.85811881218456 32 AT1G64680 unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G03055.1); Has 146 Blast hits to 146 proteins in 26 species: Archae - 0; Bacteria - 6; Metazoa - 0; Fungi - 0; Plants - 125; Viruses - 0; Other Eukaryotes - 15 (source: NCBI BLink). 0.857684235387143 33 AT3G46780 plastid transcriptionally active 16 PTAC16 0.8573873635815805 34 AT5G07020 proline-rich family protein 0.8563625406543799 35 AT3G26650 glyceraldehyde 3-phosphate dehydrogenase A subunit GAPA-1, GAPA 0.8558325639582134 36 AT4G32260 ATPase, F0 complex, subunit B/B', bacterial/chloroplast 0.8542983856253659 37 AT5G66570 PS II oxygen-evolving complex 1 OEE33, PSBO1, OEE1, MSP-1, PSBO-1, OE33 0.8524758566269752 38 AT5G23120 photosystem II stability/assembly factor, chloroplast (HCF136) HCF136 0.8511749568690031 39 AT3G48420 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 0.8496391747954678 49 AT4G04640 ATPase, F1 complex, gamma subunit protein ATPC1 0.8488453218175259 52 AT1G54780 thylakoid lumen 18.3 kDa protein TLP18.3 0.8482839082204076 42 AT1G18060 unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 74 Blast hits to 74 proteins in 29 species: Archae - 0; Bacteria - 19; Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). 0.8458931660931586 43 AT4G35250 NAD(P)-binding Rossmann-fold superfamily protein 0.8456890078793661 44 AT1G55480 protein containing PDZ domain, a K-box domain, and a TPR region ZKT 0.8422481465874605 55 AT3G12345 unknown protein; LOCATED IN: chloroplast; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). 0.8419388329157578 46 AT1G56500 haloacid dehalogenase-like hydrolase family protein 0.838914279361871 61 AT5G21430 Chaperone DnaJ-domain superfamily protein 0.8387727765399674 48 AT1G67700 unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 49 Blast hits to 49 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). 0.8375337081896578 49 AT1G77090 Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP family protein 0.8373994251646166 50 AT1G70760 inorganic carbon transport protein-related CRR23 0.8370636177770678 51 AT2G04039 unknown protein; FUNCTIONS IN: molecular_function unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2996 (InterPro:IPR021374); Has 159 Blast hits to 159 proteins in 52 species: Archae - 0; Bacteria - 76; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 45 (source: NCBI BLink). 0.8363983735985044 52 AT1G22850 SNARE associated Golgi protein family 0.8343641237910541 53 AT1G64770 NDH-dependent cyclic electron flow 1 NDH45, NDF2 0.8332267597975583 54 AT2G27290 Protein of unknown function (DUF1279) 0.8325550515055435 55 AT3G01500 carbonic anhydrase 1 CA1, ATBCA1, SABP3, ATSABP3 0.8323001610299395 56 AT2G34860 DnaJ/Hsp40 cysteine-rich domain superfamily protein EDA3 0.8312551898778066 98 AT3G61080 Protein kinase superfamily protein 0.8302860761814201 58 AT1G12900 glyceraldehyde 3-phosphate dehydrogenase A subunit 2 GAPA-2 0.830217562419259 83 AT5G38520 alpha/beta-Hydrolases superfamily protein 0.8297393476300263 60 AT1G75460 ATP-dependent protease La (LON) domain protein 0.8292394467630395 61 AT5G16710 dehydroascorbate reductase 1 DHAR3 0.8292082206080016 62 AT2G01110 Sec-independent periplasmic protein translocase PGA2, APG2, TATC, UNE3 0.8291072225383984 63 AT5G19220 ADP glucose pyrophosphorylase large subunit 1 APL1, ADG2 0.8275384059486256 65 AT1G50320 thioredoxin X THX, ATHX, ATX 0.8251014625329068 65 AT5G58260 oxidoreductases, acting on NADH or NADPH, quinone or similar compound as acceptor 0.8250264566792912 70 AT1G65260 plastid transcriptionally active 4 PTAC4, VIPP1 0.8242492473041412 67 AT2G35660 FAD/NAD(P)-binding oxidoreductase family protein CTF2A 0.8238681590208131 68 AT5G51110 Transcriptional coactivator/pterin dehydratase 0.8234605234772194 99 AT3G02730 thioredoxin F-type 1 ATF1, TRXF1 0.8221837976413335 70 AT1G03680 thioredoxin M-type 1 ATHM1, THM1, TRX-M1, ATM1 0.8178966279444297 72 AT2G34460 NAD(P)-binding Rossmann-fold superfamily protein 0.816355528846007 73 AT1G19150 photosystem I light harvesting complex gene 6 LHCA2*1, LHCA6 0.8154700094243762 90 AT1G50250 FTSH protease 1 FTSH1 0.814952348903174 75 AT1G51110 Plastid-lipid associated protein PAP / fibrillin family protein 0.8129401426010335 77 AT1G16080 unknown protein; LOCATED IN: apoplast, chloroplast stroma, chloroplast, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; Has 81 Blast hits to 81 proteins in 28 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). 0.8122366879258724 77 AT1G04420 NAD(P)-linked oxidoreductase superfamily protein 0.8112907894366729 78 AT5G13410 FKBP-like peptidyl-prolyl cis-trans isomerase family protein 0.8108013585932028 80 AT2G27680 NAD(P)-linked oxidoreductase superfamily protein 0.8099295176847232 81 AT2G21960 unknown protein; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G56180.1); Has 224 Blast hits to 222 proteins in 59 species: Archae - 0; Bacteria - 65; Metazoa - 0; Fungi - 0; Plants - 134; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). 0.8092720470683873 82 AT1G52510 alpha/beta-Hydrolases superfamily protein 0.8091600606261413 83 AT1G34000 one-helix protein 2 OHP2 0.8078272651937736 84 AT1G12250 Pentapeptide repeat-containing protein 0.8075938421910749 85 AT1G62750 Translation elongation factor EFG/EF2 protein ATSCO1/CPEF-G, SCO1, ATSCO1 0.8073685276350383 86 AT5G58330 lactate/malate dehydrogenase family protein 0.8051085259367791 88 AT1G31190 myo-inositol monophosphatase like 1 IMPL1 0.8041145231126473 89 AT3G50820 photosystem II subunit O-2 OEC33, PSBO-2, PSBO2 0.8027143039898476 91 AT4G28740 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3493 (InterPro:IPR021883); BEST Arabidopsis thaliana protein match is: tetratricopeptide repeat (TPR)-containing protein (TAIR:AT1G02910.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). 0.8005478756455175 92 AT1G32080 membrane protein, putative 0.7999483325843748 93 AT5G57930 Arabidopsis thaliana protein of unknown function (DUF794) emb1629, APO2 0.7995390517725105 94 AT2G30170 Protein phosphatase 2C family protein 0.7990651405159691 96 AT1G71480 Nuclear transport factor 2 (NTF2) family protein 0.7974988542646073 97 AT2G32480 ARABIDOPSIS SERIN PROTEASE ARASP 0.7966131253715645 98 AT3G27925 DegP protease 1 DEGP1, Deg1 0.7965867981583571 99