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  5. Gb_20751

Gb_20751


Description : component Pex1 of Pex1-Pex6 subcomplex


Gene families : OG0000169 (Archaeplastida) Phylogenetic Tree(s): OG0000169_tree ,
OG_05_0007088 (LandPlants) Phylogenetic Tree(s): OG_05_0007088_tree ,
OG_06_0006976 (SeedPlants) Phylogenetic Tree(s): OG_06_0006976_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_20751
Cluster HCCA: Cluster_324

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00072p00117380 evm_27.TU.AmTr_v1... Cell division control protein 48 homolog D... 0.02 Archaeplastida
AT3G56690 CIP111 Cam interacting protein 111 0.03 Archaeplastida
Cpa|evm.model.tig00021463.10 No alias Cell division control protein 48 homolog D... 0.02 Archaeplastida
Cre17.g700300 No alias Cell division control protein 48 homolog B... 0.02 Archaeplastida
LOC_Os04g52690.3 No alias component Pex6 of Pex1-Pex6 subcomplex 0.03 Archaeplastida
LOC_Os06g01980.1 No alias Cell division control protein 48 homolog C... 0.02 Archaeplastida
LOC_Os11g11340.1 No alias Calmodulin-interacting protein 111 OS=Arabidopsis... 0.02 Archaeplastida
MA_10431342g0010 No alias Calmodulin-interacting protein 111 OS=Arabidopsis... 0.03 Archaeplastida
Mp2g13350.1 No alias Calmodulin-interacting protein 111 OS=Arabidopsis... 0.04 Archaeplastida
Mp3g11610.1 No alias component Pex6 of Pex1-Pex6 subcomplex 0.02 Archaeplastida
Mp6g06650.1 No alias component Pex1 of Pex1-Pex6 subcomplex 0.02 Archaeplastida
Pp3c15_10770V3.1 No alias ATPase, AAA-type, CDC48 protein 0.03 Archaeplastida
Pp3c17_21090V3.1 No alias peroxin 6 0.02 Archaeplastida
Pp3c6_25280V3.1 No alias Cam interacting protein 111 0.03 Archaeplastida
Pp3c9_3020V3.1 No alias ATPase, AAA-type, CDC48 protein 0.02 Archaeplastida
Solyc04g057960.4.1 No alias component Pex1 of Pex1-Pex6 subcomplex 0.04 Archaeplastida
Zm00001e021405_P001 No alias Calmodulin-interacting protein 111 OS=Arabidopsis... 0.02 Archaeplastida
Zm00001e022089_P003 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e036688_P001 No alias Cell division control protein 48 homolog C... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0005777 peroxisome IEA Interproscan
BP GO:0007031 peroxisome organization IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005667 transcription factor complex IEP Neighborhood
CC GO:0005669 transcription factor TFIID complex IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
CC GO:0044798 nuclear transcription factor complex IEP Neighborhood
CC GO:0090575 RNA polymerase II transcription factor complex IEP Neighborhood
BP GO:1902600 proton transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR015342 PEX-N_psi_beta-barrel 100 174
IPR003959 ATPase_AAA_core 621 767
IPR003959 ATPase_AAA_core 912 1040
No external refs found!