Gb_20765

Description : Chitinase 5 OS=Oryza sativa subsp. japonica (sp|q7y1z0|chi5_orysj : 194.0)

Gene families : OG0000104 (Archaeplastida) Phylogenetic Tree(s): OG0000104_tree ,
OG_05_0000272 (LandPlants) Phylogenetic Tree(s): OG_05_0000272_tree ,
OG_06_0056394 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_20765
Cluster	HCCA: Cluster_33

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00022p00097040	evm_27.TU.AmTr_v1...	Cell wall.cellulose.synthesis.cellulose microfibrils and...	0.04	Archaeplastida
AT2G43620	No alias	Chitinase family protein	0.03	Archaeplastida
MA_10430424g0010	No alias	Chitinase 5 OS=Oryza sativa subsp. japonica...	0.03	Archaeplastida
MA_10431378g0010	No alias	Chitinase 4 OS=Oryza sativa subsp. japonica...	0.03	Archaeplastida
MA_10431378g0020	No alias	Chitinase 6 OS=Oryza sativa subsp. japonica...	0.03	Archaeplastida
MA_18470g0010	No alias	Basic endochitinase C OS=Secale cereale...	0.05	Archaeplastida
MA_381956g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_448160g0010	No alias	Chitinase 5 OS=Oryza sativa subsp. japonica...	0.04	Archaeplastida
MA_5970350g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_80085g0010	No alias	Basic endochitinase C OS=Secale cereale...	0.05	Archaeplastida
MA_9682123g0010	No alias	Chitinase 4 OS=Oryza sativa subsp. japonica...	0.07	Archaeplastida
Pp3c24_15000V3.1	No alias	Chitinase family protein	0.04	Archaeplastida
Solyc02g061770.4.1	No alias	Basic endochitinase (Fragment) OS=Solanum lycopersicum...	0.02	Archaeplastida
Zm00001e000271_P001	No alias	Chitinase 11 OS=Oryza sativa subsp. japonica...	0.03	Archaeplastida
Zm00001e015056_P001	No alias	Chitinase 6 OS=Oryza sativa subsp. japonica...	0.03	Archaeplastida
Zm00001e025447_P001	No alias	Chitinase 10 OS=Oryza sativa subsp. japonica...	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
MF	GO:0004568	chitinase activity	IEA	Interproscan
BP	GO:0006022	aminoglycan metabolic process	None	Extended
BP	GO:0006026	aminoglycan catabolic process	None	Extended
BP	GO:0006030	chitin metabolic process	None	Extended
BP	GO:0006032	chitin catabolic process	IEA	Interproscan
BP	GO:0006040	amino sugar metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0016998	cell wall macromolecule catabolic process	IEA	Interproscan
BP	GO:0017144	drug metabolic process	None	Extended
BP	GO:0042737	drug catabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044036	cell wall macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046348	amino sugar catabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901071	glucosamine-containing compound metabolic process	None	Extended
BP	GO:1901072	glucosamine-containing compound catabolic process	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901136	carbohydrate derivative catabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901565	organonitrogen compound catabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0000287	magnesium ion binding	IEP	Neighborhood
BP	GO:0006486	protein glycosylation	IEP	Neighborhood
MF	GO:0008373	sialyltransferase activity	IEP	Neighborhood
MF	GO:0010333	terpene synthase activity	IEP	Neighborhood
MF	GO:0016757	transferase activity, transferring glycosyl groups	IEP	Neighborhood
MF	GO:0016835	carbon-oxygen lyase activity	IEP	Neighborhood
MF	GO:0016838	carbon-oxygen lyase activity, acting on phosphates	IEP	Neighborhood
BP	GO:0043413	macromolecule glycosylation	IEP	Neighborhood
BP	GO:0070085	glycosylation	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR000726	Glyco_hydro_19_cat	122	163
IPR000726	Glyco_hydro_19_cat	172	217
IPR000726	Glyco_hydro_19_cat	38	102

External Links

No external refs found!

Gb_20765

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation