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  5. Gb_20809

Gb_20809


Description : no hits & (original description: none)


Gene families : OG0000346 (Archaeplastida) Phylogenetic Tree(s): OG0000346_tree ,
OG_05_0009220 (LandPlants) Phylogenetic Tree(s): OG_05_0009220_tree ,
OG_06_0011943 (SeedPlants) Phylogenetic Tree(s): OG_06_0011943_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_20809
Cluster HCCA: Cluster_327

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00056p00047160 evm_27.TU.AmTr_v1... Probable inactive ATP-dependent zinc metalloprotease... 0.03 Archaeplastida
AMTR_s00106p00108310 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.metallopeptidase... 0.03 Archaeplastida
AT3G02450 No alias cell division protein ftsH, putative 0.03 Archaeplastida
AT4G23940 No alias FtsH extracellular protease family 0.05 Archaeplastida
Cpa|evm.model.tig00022075.42 No alias ATP-dependent zinc metalloprotease FTSH, chloroplastic... 0.02 Archaeplastida
GSVIVT01017029001 No alias Probable inactive ATP-dependent zinc metalloprotease... 0.03 Archaeplastida
GSVIVT01019239001 No alias Probable inactive ATP-dependent zinc metalloprotease... 0.04 Archaeplastida
LOC_Os04g39190.1 No alias component FtsHi of protein translocation ATPase motor complex 0.04 Archaeplastida
MA_10435856g0010 No alias Probable inactive ATP-dependent zinc metalloprotease... 0.03 Archaeplastida
Mp6g01370.1 No alias Probable inactive ATP-dependent zinc metalloprotease... 0.06 Archaeplastida
Mp6g15080.1 No alias component FtsHi of protein translocation ATPase motor complex 0.05 Archaeplastida
Pp3c17_20370V3.1 No alias AAA-type ATPase family protein 0.03 Archaeplastida
Pp3c4_20860V3.1 No alias cell division protein ftsH, putative 0.03 Archaeplastida
Solyc03g046340.3.1 No alias component FtsHi of protein translocation ATPase motor complex 0.04 Archaeplastida
Solyc08g082530.4.1 No alias Probable inactive ATP-dependent zinc metalloprotease... 0.08 Archaeplastida
Zm00001e007868_P001 No alias component FtsHi of protein translocation ATPase motor complex 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003852 2-isopropylmalate synthase activity IEP Neighborhood
MF GO:0003916 DNA topoisomerase activity IEP Neighborhood
MF GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006265 DNA topological change IEP Neighborhood
BP GO:0006520 cellular amino acid metabolic process IEP Neighborhood
BP GO:0006551 leucine metabolic process IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
MF GO:0008094 DNA-dependent ATPase activity IEP Neighborhood
BP GO:0009081 branched-chain amino acid metabolic process IEP Neighborhood
BP GO:0009082 branched-chain amino acid biosynthetic process IEP Neighborhood
BP GO:0009098 leucine biosynthetic process IEP Neighborhood
BP GO:0010024 phytochromobilin biosynthetic process IEP Neighborhood
MF GO:0016597 amino acid binding IEP Neighborhood
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Neighborhood
MF GO:0016636 oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor IEP Neighborhood
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
MF GO:0031406 carboxylic acid binding IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
BP GO:0033013 tetrapyrrole metabolic process IEP Neighborhood
BP GO:0033014 tetrapyrrole biosynthetic process IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
MF GO:0043177 organic acid binding IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Neighborhood
MF GO:0050897 cobalt ion binding IEP Neighborhood
BP GO:0051202 phytochromobilin metabolic process IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
MF GO:0061505 DNA topoisomerase II activity IEP Neighborhood
BP GO:0071103 DNA conformation change IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!