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  5. Gb_20867

Gb_20867


Description : Cyclic dof factor 3 OS=Arabidopsis thaliana (sp|q8lfv3|cdf3_arath : 95.1)


Gene families : OG0000060 (Archaeplastida) Phylogenetic Tree(s): OG0000060_tree ,
OG_05_0000025 (LandPlants) Phylogenetic Tree(s): OG_05_0000025_tree ,
OG_06_0006114 (SeedPlants) Phylogenetic Tree(s): OG_06_0006114_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_20867
Cluster HCCA: Cluster_246

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00248860 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.02 Archaeplastida
AMTR_s00030p00153440 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.02 Archaeplastida
AMTR_s00030p00156320 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
AT1G07640 OBP2 Dof-type zinc finger DNA-binding family protein 0.03 Archaeplastida
AT2G34140 No alias Dof-type zinc finger DNA-binding family protein 0.02 Archaeplastida
AT4G38000 DOF4.7 DNA binding with one finger 4.7 0.03 Archaeplastida
GSVIVT01007992001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.05 Archaeplastida
GSVIVT01016887001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
GSVIVT01021212001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.04 Archaeplastida
GSVIVT01024986001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.06 Archaeplastida
LOC_Os03g55610.1 No alias transcription factor (DOF) 0.04 Archaeplastida
LOC_Os07g13260.1 No alias transcription factor (DOF) 0.03 Archaeplastida
MA_16692g0010 No alias transcription factor (DOF) 0.04 Archaeplastida
MA_18267g0010 No alias transcription factor (DOF) 0.03 Archaeplastida
MA_459791g0010 No alias transcription factor (DOF) 0.02 Archaeplastida
MA_83624g0010 No alias transcription factor (DOF) 0.02 Archaeplastida
MA_939289g0010 No alias transcription factor (DOF) 0.02 Archaeplastida
Mp1g18540.1 No alias no hits & (original description: none) 0.01 Archaeplastida
Mp2g20790.1 No alias transcription factor (DOF) 0.01 Archaeplastida
Solyc03g115940.4.1 No alias transcription factor (DOF) 0.03 Archaeplastida
Solyc06g062520.1.1 No alias transcription factor (DOF) 0.05 Archaeplastida
Solyc09g010680.3.1 No alias transcription factor (DOF) 0.03 Archaeplastida
Solyc10g086440.2.1 No alias transcription factor (DOF) 0.04 Archaeplastida
Zm00001e001988_P001 No alias transcription factor (DOF) 0.02 Archaeplastida
Zm00001e004476_P002 No alias transcription factor (DOF) 0.02 Archaeplastida
Zm00001e005107_P001 No alias transcription factor (DOF) 0.03 Archaeplastida
Zm00001e012824_P001 No alias transcription factor (DOF) 0.05 Archaeplastida
Zm00001e023218_P004 No alias transcription factor (DOF) 0.02 Archaeplastida
Zm00001e034454_P001 No alias transcription factor (DOF) 0.06 Archaeplastida
Zm00001e035892_P001 No alias transcription factor (DOF) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!