1. Home
  2. Species
  3. Gingko biloba
  4. Sequence
  5. Gb_21183

Gb_21183


Description : Enzyme classification.EC_1 oxidoreductases.EC_1.1 oxidoreductase acting on CH-OH group of donor(50.1.1 : 570.4) & Berberine bridge enzyme-like 22 OS=Arabidopsis thaliana (sp|q9suc6|bbe22_arath : 360.0)


Gene families : OG0000172 (Archaeplastida) Phylogenetic Tree(s): OG0000172_tree ,
OG_05_0000076 (LandPlants) Phylogenetic Tree(s): OG_05_0000076_tree ,
OG_06_0000069 (SeedPlants) Phylogenetic Tree(s): OG_06_0000069_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_21183
Cluster HCCA: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00038p00162870 evm_27.TU.AmTr_v1... Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 Archaeplastida
AMTR_s00038p00164300 evm_27.TU.AmTr_v1... Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 Archaeplastida
AT1G26390 No alias FAD-binding Berberine family protein 0.03 Archaeplastida
AT1G26410 No alias FAD-binding Berberine family protein 0.03 Archaeplastida
AT1G30700 No alias FAD-binding Berberine family protein 0.05 Archaeplastida
AT5G44360 No alias FAD-binding Berberine family protein 0.02 Archaeplastida
GSVIVT01015790001 No alias Berberine bridge enzyme-like 21 OS=Arabidopsis thaliana 0.07 Archaeplastida
GSVIVT01020745001 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.07 Archaeplastida
GSVIVT01020746001 No alias Berberine bridge enzyme-like 13 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01021723001 No alias Berberine bridge enzyme-like 11 OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01021734001 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 Archaeplastida
Gb_03609 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.04 Archaeplastida
Gb_21186 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.06 Archaeplastida
LOC_Os06g35700.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 Archaeplastida
MA_10144220g0010 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.04 Archaeplastida
MA_10427412g0010 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.04 Archaeplastida
MA_162773g0010 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.04 Archaeplastida
MA_186285g0010 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 Archaeplastida
MA_228933g0010 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 Archaeplastida
MA_5468901g0010 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.05 Archaeplastida
MA_613919g0010 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.05 Archaeplastida
MA_8334627g0010 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 Archaeplastida
MA_8516716g0010 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.05 Archaeplastida
Mp7g02610.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 Archaeplastida
Solyc02g069690.1.1 No alias Berberine bridge enzyme-like 15 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc02g070090.1.1 No alias Berberine bridge enzyme-like 8 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc02g070160.1.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.04 Archaeplastida
Solyc06g065060.1.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 Archaeplastida
Solyc06g065070.1.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 Archaeplastida
Zm00001e014361_P001 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 Archaeplastida
Zm00001e030681_P001 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 Archaeplastida
Zm00001e037256_P001 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
MF GO:0050660 flavin adenine dinucleotide binding IEA Interproscan
BP GO:0055114 oxidation-reduction process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004420 hydroxymethylglutaryl-CoA reductase (NADPH) activity IEP Neighborhood
MF GO:0004421 hydroxymethylglutaryl-CoA synthase activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006720 isoprenoid metabolic process IEP Neighborhood
BP GO:0006766 vitamin metabolic process IEP Neighborhood
BP GO:0006767 water-soluble vitamin metabolic process IEP Neighborhood
BP GO:0006771 riboflavin metabolic process IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
BP GO:0008299 isoprenoid biosynthetic process IEP Neighborhood
MF GO:0008531 riboflavin kinase activity IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009110 vitamin biosynthetic process IEP Neighborhood
BP GO:0009231 riboflavin biosynthetic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0015936 coenzyme A metabolic process IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
BP GO:0033865 nucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP Neighborhood
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Neighborhood
BP GO:0042726 flavin-containing compound metabolic process IEP Neighborhood
BP GO:0042727 flavin-containing compound biosynthetic process IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR012951 BBE 457 514
IPR006094 Oxid_FAD_bind_N 75 209
No external refs found!