Gb_21316

Description : Putative pentatricopeptide repeat-containing protein At3g13770, mitochondrial OS=Arabidopsis thaliana (sp|q9lic3|pp227_arath : 495.0)

Gene families : OG0015940 (Archaeplastida) Phylogenetic Tree(s): OG0015940_tree ,
OG_05_0058470 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0051545 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_21316
Cluster	HCCA: Cluster_104

Target	Alias	Description	ECC score	Gene Family Method	Actions
MA_8985970g0010	No alias	Putative pentatricopeptide repeat-containing protein...	0.07	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002885	Pentatricopeptide_repeat	316	365
IPR002885	Pentatricopeptide_repeat	159	207
IPR032867	DYW_dom	490	603
IPR002885	Pentatricopeptide_repeat	458	485
IPR002885	Pentatricopeptide_repeat	70	91
IPR002885	Pentatricopeptide_repeat	391	415
IPR002885	Pentatricopeptide_repeat	736	756

External Links

No external refs found!

Gb_21316

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation