- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : no hits & (original description: none)
Gene families : OG0002257 (Archaeplastida) Phylogenetic Tree(s): OG0002257_tree ,
OG_05_0001830 (LandPlants) Phylogenetic Tree(s): OG_05_0001830_tree ,
OG_06_0004835 (SeedPlants) Phylogenetic Tree(s): OG_06_0004835_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Gb_21386 | |
| Cluster | HCCA: Cluster_302 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G53800 | No alias | unknown protein; BEST Arabidopsis thaliana protein match... | 0.02 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0001522 | pseudouridine synthesis | IEP | Neighborhood |
| MF | GO:0003735 | structural constituent of ribosome | IEP | Neighborhood |
| MF | GO:0003824 | catalytic activity | IEP | Neighborhood |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | Neighborhood |
| MF | GO:0005198 | structural molecule activity | IEP | Neighborhood |
| BP | GO:0006399 | tRNA metabolic process | IEP | Neighborhood |
| BP | GO:0008150 | biological_process | IEP | Neighborhood |
| BP | GO:0008152 | metabolic process | IEP | Neighborhood |
| BP | GO:0009451 | RNA modification | IEP | Neighborhood |
| MF | GO:0009982 | pseudouridine synthase activity | IEP | Neighborhood |
| BP | GO:0015979 | photosynthesis | IEP | Neighborhood |
| BP | GO:0016070 | RNA metabolic process | IEP | Neighborhood |
| MF | GO:0016491 | oxidoreductase activity | IEP | Neighborhood |
| MF | GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor | IEP | Neighborhood |
| MF | GO:0016742 | hydroxymethyl-, formyl- and related transferase activity | IEP | Neighborhood |
| MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | Neighborhood |
| MF | GO:0016853 | isomerase activity | IEP | Neighborhood |
| MF | GO:0016854 | racemase and epimerase activity | IEP | Neighborhood |
| MF | GO:0016857 | racemase and epimerase activity, acting on carbohydrates and derivatives | IEP | Neighborhood |
| MF | GO:0016866 | intramolecular transferase activity | IEP | Neighborhood |
| MF | GO:0016874 | ligase activity | IEP | Neighborhood |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | Neighborhood |
| MF | GO:0031072 | heat shock protein binding | IEP | Neighborhood |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0034660 | ncRNA metabolic process | IEP | Neighborhood |
| BP | GO:0043038 | amino acid activation | IEP | Neighborhood |
| BP | GO:0043039 | tRNA aminoacylation | IEP | Neighborhood |
| MF | GO:0051082 | unfolded protein binding | IEP | Neighborhood |
| MF | GO:0051920 | peroxiredoxin activity | IEP | Neighborhood |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Neighborhood |
| MF | GO:0140101 | catalytic activity, acting on a tRNA | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR003611 | NUMOD3 | 169 | 196 |
| No external refs found! |