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  5. AT1G10390

AT1G10390


Description : Nucleoporin autopeptidase


Gene families : OG0001288 (Archaeplastida) Phylogenetic Tree(s): OG0001288_tree ,
OG_05_0003828 (LandPlants) Phylogenetic Tree(s): OG_05_0003828_tree ,
OG_06_0003888 (SeedPlants) Phylogenetic Tree(s): OG_06_0003888_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G10390
Cluster HCCA: Cluster_145

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01019716001 No alias Protein translocation.nucleus.nucleocytoplasmic... 0.02 Archaeplastida
Gb_29033 No alias NUP96 scaffold nucleoporin of nuclear pore complex 0.03 Archaeplastida
MA_10434126g0020 No alias NUP96 scaffold nucleoporin of nuclear pore complex 0.02 Archaeplastida
MA_62342g0010 No alias NUP98 nucleoporin of nuclear pore complex 0.04 Archaeplastida
Solyc04g007280.3.1 No alias NUP98 nucleoporin of nuclear pore complex 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005215 transporter activity ISS Interproscan
MF GO:0005515 protein binding IPI Interproscan
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005635 nuclear envelope IDA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000059 obsolete protein import into nucleus, docking IEP Neighborhood
BP GO:0000911 cytokinesis by cell plate formation IEP Neighborhood
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0004674 protein serine/threonine kinase activity IEP Neighborhood
CC GO:0005643 nuclear pore IEP Neighborhood
BP GO:0006401 RNA catabolic process IEP Neighborhood
BP GO:0006402 mRNA catabolic process IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006470 protein dephosphorylation IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
BP GO:0006487 protein N-linked glycosylation IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
BP GO:0007062 sister chromatid cohesion IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0008284 positive regulation of cell proliferation IEP Neighborhood
BP GO:0009292 genetic transfer IEP Neighborhood
BP GO:0009294 DNA mediated transformation IEP Neighborhood
BP GO:0009880 embryonic pattern specification IEP Neighborhood
BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0010014 meristem initiation IEP Neighborhood
BP GO:0010072 primary shoot apical meristem specification IEP Neighborhood
BP GO:0010431 seed maturation IEP Neighborhood
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016311 dephosphorylation IEP Neighborhood
BP GO:0019439 aromatic compound catabolic process IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
BP GO:0022402 cell cycle process IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
BP GO:0032506 cytokinetic process IEP Neighborhood
BP GO:0034655 nucleobase-containing compound catabolic process IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0044270 cellular nitrogen compound catabolic process IEP Neighborhood
BP GO:0044764 multi-organism cellular process IEP Neighborhood
BP GO:0045595 regulation of cell differentiation IEP Neighborhood
BP GO:0045787 positive regulation of cell cycle IEP Neighborhood
BP GO:0045931 positive regulation of mitotic cell cycle IEP Neighborhood
BP GO:0046700 heterocycle catabolic process IEP Neighborhood
BP GO:0046777 protein autophosphorylation IEP Neighborhood
BP GO:0048519 negative regulation of biological process IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
BP GO:0080119 ER body organization IEP Neighborhood
BP GO:0090421 embryonic meristem initiation IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
BP GO:1901361 organic cyclic compound catabolic process IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1902410 mitotic cytokinetic process IEP Neighborhood
BP GO:1903047 mitotic cell cycle process IEP Neighborhood
InterPro domains Description Start Stop
IPR007230 Peptidase_S59 886 1032
No external refs found!