Gb_21524


Description : ATG8 autophagosome ubiquitin-fold protein


Gene families : OG0000927 (Archaeplastida) Phylogenetic Tree(s): OG0000927_tree ,
OG_05_0064668 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0058240 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_21524
Cluster HCCA: Cluster_339

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00037p00146990 evm_27.TU.AmTr_v1... Vesicle trafficking.autophagosome formation.ATG8/ATG12... 0.03 Archaeplastida
AT1G62040 ATG8C Ubiquitin-like superfamily protein 0.03 Archaeplastida
Cre16.g689650 No alias Vesicle trafficking.autophagosome formation.ATG8/ATG12... 0.03 Archaeplastida
GSVIVT01030430001 No alias Vesicle trafficking.autophagosome formation.ATG8/ATG12... 0.03 Archaeplastida
LOC_Os07g32800.2 No alias ATG8 autophagosome ubiquitin-fold protein 0.04 Archaeplastida
MA_6581216g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
Mp1g21590.1 No alias ATG8 autophagosome ubiquitin-fold protein 0.04 Archaeplastida
Pp3c1_32170V3.1 No alias Ubiquitin-like superfamily protein 0.02 Archaeplastida
Solyc01g068060.4.1 No alias ATG8 autophagosome ubiquitin-fold protein 0.03 Archaeplastida
Solyc08g078820.3.1 No alias ATG8 autophagosome ubiquitin-fold protein 0.04 Archaeplastida
Solyc10g006270.4.1 No alias No annotation 0.07 Archaeplastida
Zm00001e006887_P001 No alias ATG8 autophagosome ubiquitin-fold protein 0.03 Archaeplastida
Zm00001e010463_P001 No alias ATG8 autophagosome ubiquitin-fold protein 0.03 Archaeplastida
Zm00001e021618_P001 No alias ATG8 autophagosome ubiquitin-fold protein 0.03 Archaeplastida
Zm00001e039966_P001 No alias ATG8 autophagosome ubiquitin-fold protein 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0004665 prephenate dehydrogenase (NADP+) activity IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
BP GO:0006570 tyrosine metabolic process IEP Neighborhood
BP GO:0006571 tyrosine biosynthetic process IEP Neighborhood
MF GO:0008977 prephenate dehydrogenase (NAD+) activity IEP Neighborhood
BP GO:0009072 aromatic amino acid family metabolic process IEP Neighborhood
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Neighborhood
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Neighborhood
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016791 phosphatase activity IEP Neighborhood
MF GO:0016872 intramolecular lyase activity IEP Neighborhood
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Neighborhood
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
MF GO:0033897 ribonuclease T2 activity IEP Neighborhood
MF GO:0042578 phosphoric ester hydrolase activity IEP Neighborhood
BP GO:1901607 alpha-amino acid biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR004241 Atg8-like 55 118
No external refs found!