Description : microtubule orientation-stabilizing factor (SABRE)
Gene families : OG0002914 (Archaeplastida) Phylogenetic Tree(s): OG0002914_tree ,
OG_05_0004076 (LandPlants) Phylogenetic Tree(s): OG_05_0004076_tree ,
OG_06_0003924 (SeedPlants) Phylogenetic Tree(s): OG_06_0003924_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Gb_21610 | |
Cluster | HCCA: Cluster_223 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00033p00218820 | evm_27.TU.AmTr_v1... | Cell cycle.cytokinesis.preprophase microtubule... | 0.03 | Archaeplastida | |
AT1G58250 | SAB | Golgi-body localisation protein domain ;RNA pol II... | 0.11 | Archaeplastida | |
GSVIVT01009199001 | No alias | Cell cycle.cytokinesis.preprophase microtubule... | 0.1 | Archaeplastida | |
LOC_Os03g47754.1 | No alias | Protein SABRE OS=Arabidopsis thaliana... | 0.1 | Archaeplastida | |
LOC_Os03g47760.1 | No alias | Protein SABRE OS=Arabidopsis thaliana... | 0.03 | Archaeplastida | |
MA_10307911g0010 | No alias | Protein KINKY POLLEN OS=Arabidopsis thaliana... | 0.1 | Archaeplastida | |
MA_10426510g0010 | No alias | Protein KINKY POLLEN OS=Arabidopsis thaliana... | 0.04 | Archaeplastida | |
MA_10435339g0010 | No alias | no hits & (original description: none) | 0.15 | Archaeplastida | |
MA_10435593g0010 | No alias | Protein SABRE OS=Arabidopsis thaliana... | 0.04 | Archaeplastida | |
MA_36795g0020 | No alias | Protein SABRE OS=Arabidopsis thaliana... | 0.12 | Archaeplastida | |
MA_54574g0010 | No alias | Protein SABRE OS=Arabidopsis thaliana... | 0.16 | Archaeplastida | |
Mp7g01470.1 | No alias | Protein SABRE OS=Arabidopsis thaliana... | 0.06 | Archaeplastida | |
Pp3c12_12980V3.1 | No alias | Golgi-body localisation protein domain ;RNA pol II... | 0.09 | Archaeplastida | |
Smo146641 | No alias | Cell cycle.cytokinesis.preprophase microtubule... | 0.03 | Archaeplastida | |
Solyc04g076550.3.1 | No alias | Protein SABRE OS=Arabidopsis thaliana... | 0.03 | Archaeplastida | |
Zm00001e005147_P002 | No alias | microtubule orientation-stabilizing factor (SABRE) | 0.09 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | Neighborhood |
BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | Neighborhood |
BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | Neighborhood |
MF | GO:0003682 | chromatin binding | IEP | Neighborhood |
MF | GO:0005488 | binding | IEP | Neighborhood |
MF | GO:0005543 | phospholipid binding | IEP | Neighborhood |
BP | GO:0006397 | mRNA processing | IEP | Neighborhood |
BP | GO:0008380 | RNA splicing | IEP | Neighborhood |
MF | GO:0017069 | snRNA binding | IEP | Neighborhood |
MF | GO:0017070 | U6 snRNA binding | IEP | Neighborhood |
MF | GO:0030623 | U5 snRNA binding | IEP | Neighborhood |
MF | GO:0035091 | phosphatidylinositol binding | IEP | Neighborhood |
BP | GO:0043248 | proteasome assembly | IEP | Neighborhood |
MF | GO:0060090 | molecular adaptor activity | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR019443 | FMP27_C | 2026 | 2609 |
No external refs found! |