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  5. Gb_21610

Gb_21610


Description : microtubule orientation-stabilizing factor (SABRE)


Gene families : OG0002914 (Archaeplastida) Phylogenetic Tree(s): OG0002914_tree ,
OG_05_0004076 (LandPlants) Phylogenetic Tree(s): OG_05_0004076_tree ,
OG_06_0003924 (SeedPlants) Phylogenetic Tree(s): OG_06_0003924_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_21610
Cluster HCCA: Cluster_223

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00033p00218820 evm_27.TU.AmTr_v1... Cell cycle.cytokinesis.preprophase microtubule... 0.03 Archaeplastida
AT1G58250 SAB Golgi-body localisation protein domain ;RNA pol II... 0.11 Archaeplastida
GSVIVT01009199001 No alias Cell cycle.cytokinesis.preprophase microtubule... 0.1 Archaeplastida
LOC_Os03g47754.1 No alias Protein SABRE OS=Arabidopsis thaliana... 0.1 Archaeplastida
LOC_Os03g47760.1 No alias Protein SABRE OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_10307911g0010 No alias Protein KINKY POLLEN OS=Arabidopsis thaliana... 0.1 Archaeplastida
MA_10426510g0010 No alias Protein KINKY POLLEN OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_10435339g0010 No alias no hits & (original description: none) 0.15 Archaeplastida
MA_10435593g0010 No alias Protein SABRE OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_36795g0020 No alias Protein SABRE OS=Arabidopsis thaliana... 0.12 Archaeplastida
MA_54574g0010 No alias Protein SABRE OS=Arabidopsis thaliana... 0.16 Archaeplastida
Mp7g01470.1 No alias Protein SABRE OS=Arabidopsis thaliana... 0.06 Archaeplastida
Pp3c12_12980V3.1 No alias Golgi-body localisation protein domain ;RNA pol II... 0.09 Archaeplastida
Smo146641 No alias Cell cycle.cytokinesis.preprophase microtubule... 0.03 Archaeplastida
Solyc04g076550.3.1 No alias Protein SABRE OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e005147_P002 No alias microtubule orientation-stabilizing factor (SABRE) 0.09 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
BP GO:0000398 mRNA splicing, via spliceosome IEP Neighborhood
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005543 phospholipid binding IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
MF GO:0017069 snRNA binding IEP Neighborhood
MF GO:0017070 U6 snRNA binding IEP Neighborhood
MF GO:0030623 U5 snRNA binding IEP Neighborhood
MF GO:0035091 phosphatidylinositol binding IEP Neighborhood
BP GO:0043248 proteasome assembly IEP Neighborhood
MF GO:0060090 molecular adaptor activity IEP Neighborhood
InterPro domains Description Start Stop
IPR019443 FMP27_C 2026 2609
No external refs found!