1. Home
  2. Species
  3. Gingko biloba
  4. Sequence
  5. Gb_21937

Gb_21937


Description : Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana (sp|q9sit7|pp151_arath : 549.0)


Gene families : OG0016334 (Archaeplastida) Phylogenetic Tree(s): OG0016334_tree ,
OG_05_0000075 (LandPlants) Phylogenetic Tree(s): OG_05_0000075_tree ,
OG_06_0000024 (SeedPlants) Phylogenetic Tree(s): OG_06_0000024_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_21937
Cluster HCCA: Cluster_231

Target Alias Description ECC score Gene Family Method Actions
Gb_21941 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.07 Archaeplastida
Gb_21947 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 654 677
IPR002885 Pentatricopeptide_repeat 583 607
IPR002885 Pentatricopeptide_repeat 218 244
IPR002885 Pentatricopeptide_repeat 143 191
IPR002885 Pentatricopeptide_repeat 274 323
IPR002885 Pentatricopeptide_repeat 508 556
IPR002885 Pentatricopeptide_repeat 406 454
IPR002885 Pentatricopeptide_repeat 375 404
No external refs found!