Gb_21947

Description : Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana (sp|q9shz8|pp168_arath : 567.0)

Gene families : OG0016334 (Archaeplastida) Phylogenetic Tree(s): OG0016334_tree ,
OG_05_0018218 (LandPlants) Phylogenetic Tree(s): OG_05_0018218_tree ,
OG_06_0017827 (SeedPlants) Phylogenetic Tree(s): OG_06_0017827_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Gb_21947
Cluster	HCCA: Cluster_104

Target	Alias	Description	ECC score	Gene Family Method	Actions
Gb_21937	No alias	Pentatricopeptide repeat-containing protein At2g13600...	0.07	Archaeplastida
Gb_21951	No alias	Pentatricopeptide repeat-containing protein At2g22070...	0.06	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002885	Pentatricopeptide_repeat	437	460
IPR002885	Pentatricopeptide_repeat	260	308
IPR002885	Pentatricopeptide_repeat	362	410
IPR002885	Pentatricopeptide_repeat	129	177
IPR032867	DYW_dom	537	659
IPR002885	Pentatricopeptide_repeat	229	258

External Links

No external refs found!