1. Home
  2. Species
  3. Gingko biloba
  4. Sequence
  5. Gb_21988

Gb_21988


Description : Alpha-galactosidase OS=Coffea arabica (sp|q42656|agal_cofar : 540.0) & Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase(50.3.2 : 172.7)


Gene families : OG0000636 (Archaeplastida) Phylogenetic Tree(s): OG0000636_tree ,
OG_05_0001005 (LandPlants) Phylogenetic Tree(s): OG_05_0001005_tree ,
OG_06_0001339 (SeedPlants) Phylogenetic Tree(s): OG_06_0001339_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_21988
Cluster HCCA: Cluster_494

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00171p00050000 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.02 Archaeplastida
GSVIVT01006484001 No alias Alpha-galactosidase 2 OS=Arabidopsis thaliana 0.04 Archaeplastida
Gb_04687 No alias Alpha-galactosidase 2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_21989 No alias Alpha-galactosidase OS=Coffea arabica... 0.02 Archaeplastida
MA_41308g0010 No alias Alpha-galactosidase OS=Coffea arabica... 0.02 Archaeplastida
MA_54403g0020 No alias Alpha-galactosidase 2 OS=Arabidopsis thaliana... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
MF GO:0045735 nutrient reservoir activity IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0050660 flavin adenine dinucleotide binding IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
InterPro domains Description Start Stop
IPR002241 Glyco_hydro_27 51 327
No external refs found!