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  5. Gb_22719

Gb_22719


Description : Pentatricopeptide repeat-containing protein At4g31850, chloroplastic OS=Arabidopsis thaliana (sp|q9sz52|pp344_arath : 977.0)


Gene families : OG0008852 (Archaeplastida) Phylogenetic Tree(s): OG0008852_tree ,
OG_05_0008546 (LandPlants) Phylogenetic Tree(s): OG_05_0008546_tree ,
OG_06_0005697 (SeedPlants) Phylogenetic Tree(s): OG_06_0005697_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_22719
Cluster HCCA: Cluster_660

Target Alias Description ECC score Gene Family Method Actions
Zm00001e038060_P001 No alias Pentatricopeptide repeat-containing protein At4g31850,... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0016866 intramolecular transferase activity IEP Neighborhood
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
MF GO:0022838 substrate-specific channel activity IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 411 455
IPR002885 Pentatricopeptide_repeat 481 528
IPR002885 Pentatricopeptide_repeat 867 913
IPR002885 Pentatricopeptide_repeat 797 844
IPR002885 Pentatricopeptide_repeat 621 669
IPR002885 Pentatricopeptide_repeat 936 985
IPR002885 Pentatricopeptide_repeat 341 390
IPR002885 Pentatricopeptide_repeat 1076 1116
IPR002885 Pentatricopeptide_repeat 551 599
IPR002885 Pentatricopeptide_repeat 1002 1035
IPR002885 Pentatricopeptide_repeat 303 335
IPR002885 Pentatricopeptide_repeat 767 794
IPR002885 Pentatricopeptide_repeat 1044 1073
IPR002885 Pentatricopeptide_repeat 733 758
IPR002885 Pentatricopeptide_repeat 191 250
No external refs found!