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  5. Gb_23049

Gb_23049


Description : VAMP7-type R-type SNARE longin protein


Gene families : OG0000293 (Archaeplastida) Phylogenetic Tree(s): OG0000293_tree ,
OG_05_0007573 (LandPlants) Phylogenetic Tree(s): OG_05_0007573_tree ,
OG_06_0006023 (SeedPlants) Phylogenetic Tree(s): OG_06_0006023_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_23049
Cluster HCCA: Cluster_284

Target Alias Description ECC score Gene Family Method Actions
AT4G32150 ATVAMP711, VAMP711 vesicle-associated membrane protein 711 0.03 Archaeplastida
Cre04.g224800 No alias Vesicle trafficking.SNARE target membrane recognition... 0.01 Archaeplastida
Cre04.g225850 No alias Vesicle trafficking.SNARE target membrane recognition... 0.01 Archaeplastida
Cre04.g225900 No alias Vesicle trafficking.SNARE target membrane recognition... 0.02 Archaeplastida
LOC_Os02g55990.1 No alias VAMP7-type R-type SNARE longin protein 0.03 Archaeplastida
LOC_Os03g06960.1 No alias R-SNARE component VAMP721/VAMP722 of SNARE cell-plate... 0.03 Archaeplastida
LOC_Os07g09600.1 No alias R-SNARE component VAMP721/VAMP722 of SNARE cell-plate... 0.02 Archaeplastida
LOC_Os07g14540.1 No alias R-SNARE component VAMP721/VAMP722 of SNARE cell-plate... 0.02 Archaeplastida
LOC_Os08g44430.2 No alias VAMP7-type R-type SNARE longin protein 0.02 Archaeplastida
MA_669538g0010 No alias Vesicle-associated membrane protein 714 OS=Arabidopsis... 0.02 Archaeplastida
MA_71602g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_94963g0010 No alias R-SNARE component VAMP721/VAMP722 of SNARE cell-plate... 0.03 Archaeplastida
Mp8g09980.1 No alias VAMP7-type R-type SNARE longin protein 0.01 Archaeplastida
Pp3c2_2310V3.1 No alias vesicle-associated membrane protein 726 0.02 Archaeplastida
Solyc06g083530.3.1 No alias R-SNARE component VAMP721/VAMP722 of SNARE cell-plate... 0.03 Archaeplastida
Solyc12g098180.3.1 No alias R-SNARE component VAMP721/VAMP722 of SNARE cell-plate... 0.03 Archaeplastida
Zm00001e009585_P002 No alias R-SNARE component VAMP721/VAMP722 of SNARE cell-plate... 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
MF GO:0005544 calcium-dependent phospholipid binding IEP Neighborhood
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to ER IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
MF GO:0016409 palmitoyltransferase activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
InterPro domains Description Start Stop
IPR010908 Longin_dom 29 108
IPR001388 Synaptobrevin 124 211
No external refs found!