1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT2G36710

AT2G36710


Description : Pectin lyase-like superfamily protein


Gene families : OG0000078 (Archaeplastida) Phylogenetic Tree(s): OG0000078_tree ,
OG_05_0000108 (LandPlants) Phylogenetic Tree(s): OG_05_0000108_tree ,
OG_06_0004417 (SeedPlants) Phylogenetic Tree(s): OG_06_0004417_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G36710
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00264370 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
AMTR_s00027p00247950 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
AMTR_s00056p00166920 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.04 Archaeplastida
AMTR_s00123p00050980 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
AT2G21610 ATPE11, PE11 pectinesterase 11 0.04 Archaeplastida
AT5G18990 No alias Pectin lyase-like superfamily protein 0.04 Archaeplastida
AT5G19730 No alias Pectin lyase-like superfamily protein 0.04 Archaeplastida
GSVIVT01013838001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
GSVIVT01013839001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
GSVIVT01015022001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.04 Archaeplastida
GSVIVT01015290001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.04 Archaeplastida
GSVIVT01015852001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.04 Archaeplastida
GSVIVT01018823001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
GSVIVT01028170001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.04 Archaeplastida
GSVIVT01031250001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.06 Archaeplastida
GSVIVT01033712001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
GSVIVT01034985001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.04 Archaeplastida
Gb_01459 No alias pectin methylesterase 0.06 Archaeplastida
Gb_01460 No alias pectin methylesterase 0.05 Archaeplastida
Gb_23209 No alias pectin methylesterase 0.03 Archaeplastida
Gb_32012 No alias pectin methylesterase 0.03 Archaeplastida
LOC_Os01g19440.1 No alias pectin methylesterase 0.06 Archaeplastida
LOC_Os01g44340.1 No alias pectin methylesterase 0.04 Archaeplastida
LOC_Os01g53990.1 No alias pectin methylesterase 0.03 Archaeplastida
LOC_Os07g46190.1 No alias pectin methylesterase 0.03 Archaeplastida
MA_10428610g0010 No alias pectin methylesterase 0.02 Archaeplastida
MA_10428610g0020 No alias pectin methylesterase 0.03 Archaeplastida
MA_14449g0010 No alias pectin methylesterase 0.06 Archaeplastida
MA_18312g0010 No alias pectin methylesterase 0.02 Archaeplastida
MA_19196g0010 No alias pectin methylesterase 0.04 Archaeplastida
MA_66089g0010 No alias pectin methylesterase 0.03 Archaeplastida
MA_87592g0010 No alias pectin methylesterase 0.03 Archaeplastida
MA_98283g0010 No alias pectin methylesterase 0.02 Archaeplastida
Pp3c10_18650V3.1 No alias Pectin lyase-like superfamily protein 0.06 Archaeplastida
Pp3c10_20120V3.1 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
Pp3c12_23790V3.1 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
Pp3c12_24000V3.1 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
Pp3c16_6660V3.1 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
Pp3c18_13190V3.1 No alias Pectin lyase-like superfamily protein 0.04 Archaeplastida
Pp3c1_22810V3.1 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
Pp3c1_6010V3.1 No alias Pectin lyase-like superfamily protein 0.04 Archaeplastida
Pp3c3_30560V3.1 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
Pp3c3_32350V3.1 No alias Pectin lyase-like superfamily protein 0.06 Archaeplastida
Pp3c3_35040V3.1 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
Pp3c3_35240V3.1 No alias Pectin lyase-like superfamily protein 0.04 Archaeplastida
Pp3c4_10640V3.1 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
Pp3c5_12820V3.1 No alias Pectin lyase-like superfamily protein 0.02 Archaeplastida
Pp3c8_1680V3.1 No alias Pectin lyase-like superfamily protein 0.05 Archaeplastida
Pp3c8_2010V3.1 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
Pp3c8_460V3.1 No alias Pectin lyase-like superfamily protein 0.03 Archaeplastida
Smo81583 No alias Cell wall.pectin.homogalacturonan.modification and... 0.06 Archaeplastida
Solyc01g079180.4.1 No alias pectin methylesterase 0.05 Archaeplastida
Solyc01g109740.3.1 No alias pectin methylesterase 0.05 Archaeplastida
Solyc02g075620.4.1 No alias pectin methylesterase 0.02 Archaeplastida
Solyc04g080530.3.1 No alias pectin methylesterase 0.03 Archaeplastida
Solyc07g043240.4.1 No alias pectin methylesterase 0.05 Archaeplastida
Solyc07g065350.2.1 No alias pectin methylesterase 0.04 Archaeplastida
Zm00001e027944_P002 No alias pectin methylesterase 0.04 Archaeplastida
Zm00001e033546_P001 No alias pectin methylesterase 0.03 Archaeplastida
Zm00001e035522_P001 No alias pectin methylesterase 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM Interproscan
CC GO:0009505 plant-type cell wall ISS Interproscan
MF GO:0030599 pectinesterase activity ISS Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000257 nitrilase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
BP GO:0006720 isoprenoid metabolic process IEP Neighborhood
BP GO:0006721 terpenoid metabolic process IEP Neighborhood
BP GO:0006723 cuticle hydrocarbon biosynthetic process IEP Neighborhood
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
BP GO:0007000 nucleolus organization IEP Neighborhood
BP GO:0007568 aging IEP Neighborhood
BP GO:0008299 isoprenoid biosynthetic process IEP Neighborhood
MF GO:0008422 beta-glucosidase activity IEP Neighborhood
MF GO:0008429 phosphatidylethanolamine binding IEP Neighborhood
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009739 response to gibberellin IEP Neighborhood
MF GO:0009815 1-aminocyclopropane-1-carboxylate oxidase activity IEP Neighborhood
BP GO:0009830 cell wall modification involved in abscission IEP Neighborhood
BP GO:0009850 auxin metabolic process IEP Neighborhood
BP GO:0009900 dehiscence IEP Neighborhood
BP GO:0009901 anther dehiscence IEP Neighborhood
BP GO:0009911 positive regulation of flower development IEP Neighborhood
BP GO:0010025 wax biosynthetic process IEP Neighborhood
BP GO:0010047 fruit dehiscence IEP Neighborhood
BP GO:0010166 wax metabolic process IEP Neighborhood
MF GO:0010178 IAA-amino acid conjugate hydrolase activity IEP Neighborhood
BP GO:0010197 polar nucleus fusion IEP Neighborhood
MF GO:0010210 IAA-Phe conjugate hydrolase activity IEP Neighborhood
MF GO:0010211 IAA-Leu conjugate hydrolase activity IEP Neighborhood
BP GO:0010256 endomembrane system organization IEP Neighborhood
MF GO:0010333 terpene synthase activity IEP Neighborhood
MF GO:0010334 sesquiterpene synthase activity IEP Neighborhood
BP GO:0010439 regulation of glucosinolate biosynthetic process IEP Neighborhood
BP GO:0010675 regulation of cellular carbohydrate metabolic process IEP Neighborhood
MF GO:0015926 glucosidase activity IEP Neighborhood
BP GO:0016114 terpenoid biosynthetic process IEP Neighborhood
BP GO:0016143 S-glycoside metabolic process IEP Neighborhood
BP GO:0016144 S-glycoside biosynthetic process IEP Neighborhood
BP GO:0016145 S-glycoside catabolic process IEP Neighborhood
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Neighborhood
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Neighborhood
MF GO:0016744 transferase activity, transferring aldehyde or ketonic groups IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Neighborhood
MF GO:0016815 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in nitriles IEP Neighborhood
MF GO:0016835 carbon-oxygen lyase activity IEP Neighborhood
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Neighborhood
MF GO:0018822 nitrile hydratase activity IEP Neighborhood
BP GO:0019748 secondary metabolic process IEP Neighborhood
BP GO:0019757 glycosinolate metabolic process IEP Neighborhood
BP GO:0019758 glycosinolate biosynthetic process IEP Neighborhood
BP GO:0019759 glycosinolate catabolic process IEP Neighborhood
BP GO:0019760 glucosinolate metabolic process IEP Neighborhood
BP GO:0019761 glucosinolate biosynthetic process IEP Neighborhood
BP GO:0019762 glucosinolate catabolic process IEP Neighborhood
MF GO:0019825 oxygen binding IEP Neighborhood
BP GO:0019953 sexual reproduction IEP Neighborhood
BP GO:0022411 cellular component disassembly IEP Neighborhood
MF GO:0031559 oxidosqualene cyclase activity IEP Neighborhood
BP GO:0033993 response to lipid IEP Neighborhood
MF GO:0034768 (E)-beta-ocimene synthase activity IEP Neighborhood
MF GO:0042299 lupeol synthase activity IEP Neighborhood
MF GO:0042300 beta-amyrin synthase activity IEP Neighborhood
BP GO:0042343 indole glucosinolate metabolic process IEP Neighborhood
BP GO:0042430 indole-containing compound metabolic process IEP Neighborhood
BP GO:0042762 regulation of sulfur metabolic process IEP Neighborhood
BP GO:0043255 regulation of carbohydrate biosynthetic process IEP Neighborhood
BP GO:0043446 cellular alkane metabolic process IEP Neighborhood
BP GO:0043447 alkane biosynthetic process IEP Neighborhood
BP GO:0043455 regulation of secondary metabolic process IEP Neighborhood
BP GO:0044273 sulfur compound catabolic process IEP Neighborhood
BP GO:0044277 cell wall disassembly IEP Neighborhood
BP GO:0044550 secondary metabolite biosynthetic process IEP Neighborhood
BP GO:0044703 multi-organism reproductive process IEP Neighborhood
BP GO:0046688 response to copper ion IEP Neighborhood
MF GO:0047782 coniferin beta-glucosidase activity IEP Neighborhood
BP GO:0048582 positive regulation of post-embryonic development IEP Neighborhood
MF GO:0050551 myrcene synthase activity IEP Neighborhood
BP GO:0050898 nitrile metabolic process IEP Neighborhood
BP GO:0051094 positive regulation of developmental process IEP Neighborhood
BP GO:0051240 positive regulation of multicellular organismal process IEP Neighborhood
MF GO:0052578 alpha-farnesene synthase activity IEP Neighborhood
BP GO:0080028 nitrile biosynthetic process IEP Neighborhood
MF GO:0080061 indole-3-acetonitrile nitrilase activity IEP Neighborhood
MF GO:0080109 indole-3-acetonitrile nitrile hydratase activity IEP Neighborhood
BP GO:1900376 regulation of secondary metabolite biosynthetic process IEP Neighborhood
BP GO:1901568 fatty acid derivative metabolic process IEP Neighborhood
BP GO:1901570 fatty acid derivative biosynthetic process IEP Neighborhood
BP GO:1901657 glycosyl compound metabolic process IEP Neighborhood
BP GO:1901659 glycosyl compound biosynthetic process IEP Neighborhood
BP GO:2000243 positive regulation of reproductive process IEP Neighborhood
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 92 382
No external refs found!