1. Home
  2. Species
  3. Gingko biloba
  4. Sequence
  5. Gb_23075

Gb_23075


Description : Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidopsis thaliana (sp|q7y211|pp285_arath : 637.0)


Gene families : OG0010914 (Archaeplastida) Phylogenetic Tree(s): OG0010914_tree ,
OG_05_0008543 (LandPlants) Phylogenetic Tree(s): OG_05_0008543_tree ,
OG_06_0002335 (SeedPlants) Phylogenetic Tree(s): OG_06_0002335_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_23075
Cluster HCCA: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
Gb_03481 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.06 Archaeplastida
Gb_07725 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 Archaeplastida
Gb_26313 No alias Pentatricopeptide repeat-containing protein At5g16860... 0.05 Archaeplastida
MA_481619g0010 No alias Pentatricopeptide repeat-containing protein DOT4,... 0.03 Archaeplastida
MA_491886g0010 No alias Pentatricopeptide repeat-containing protein At3g57430,... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 674 698
IPR002885 Pentatricopeptide_repeat 604 629
IPR002885 Pentatricopeptide_repeat 400 427
IPR002885 Pentatricopeptide_repeat 369 398
IPR002885 Pentatricopeptide_repeat 341 367
IPR002885 Pentatricopeptide_repeat 529 578
IPR002885 Pentatricopeptide_repeat 428 477
IPR002885 Pentatricopeptide_repeat 73 111
IPR002885 Pentatricopeptide_repeat 165 212
IPR002885 Pentatricopeptide_repeat 266 313
IPR032867 DYW_dom 703 827
No external refs found!