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  5. Gb_23183

Gb_23183


Description : no hits & (original description: none)


Gene families : OG0002775 (Archaeplastida) Phylogenetic Tree(s): OG0002775_tree ,
OG_05_0005830 (LandPlants) Phylogenetic Tree(s): OG_05_0005830_tree ,
OG_06_0006901 (SeedPlants) Phylogenetic Tree(s): OG_06_0006901_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_23183
Cluster HCCA: Cluster_216

Target Alias Description ECC score Gene Family Method Actions
AT2G34357 No alias ARM repeat superfamily protein 0.03 Archaeplastida
GSVIVT01023097001 No alias No description available 0.04 Archaeplastida
LOC_Os01g72780.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os02g54110.1 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10433024g0020 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_242029g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_55053g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c2_3190V3.1 No alias ARM repeat superfamily protein 0.02 Archaeplastida
Smo78845 No alias No description available 0.03 Archaeplastida
Solyc07g042380.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e016059_P003 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e018571_P003 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Neighborhood
CC GO:0000152 nuclear ubiquitin ligase complex IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0004674 protein serine/threonine kinase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0005680 anaphase-promoting complex IEP Neighborhood
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008173 RNA methyltransferase activity IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030127 COPII vesicle coat IEP Neighborhood
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
MF GO:0043015 gamma-tubulin binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR012978 Uncharacterised_NUC173 409 610
No external refs found!