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  5. Gb_23267

Gb_23267


Description : Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana (sp|q9shz8|pp168_arath : 611.0)


Gene families : OG0000000 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000000 (LandPlants) Phylogenetic Tree(s): OG_05_0000000_tree ,
OG_06_0000064 (SeedPlants) Phylogenetic Tree(s): OG_06_0000064_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_23267
Cluster HCCA: Cluster_125

Target Alias Description ECC score Gene Family Method Actions
AT2G02980 OTP85 Pentatricopeptide repeat (PPR) superfamily protein 0.04 Archaeplastida
AT3G12770 MEF22 mitochondrial editing factor 22 0.03 Archaeplastida
GSVIVT01008537001 No alias Pentatricopeptide repeat-containing protein At5g50390,... 0.03 Archaeplastida
GSVIVT01033004001 No alias Pentatricopeptide repeat-containing protein At3g26782,... 0.04 Archaeplastida
Gb_00852 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.05 Archaeplastida
Gb_02911 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.07 Archaeplastida
Gb_03263 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.07 Archaeplastida
Gb_03354 No alias RNA editing factor (OTP82) 0.05 Archaeplastida
Gb_03579 No alias RNA editing factor (MEF12) 0.05 Archaeplastida
Gb_03691 No alias Pentatricopeptide repeat-containing protein At3g24000,... 0.11 Archaeplastida
Gb_04079 No alias RNA editing factor (MEF19) 0.07 Archaeplastida
Gb_04417 No alias Pentatricopeptide repeat-containing protein At4g21300... 0.06 Archaeplastida
Gb_04428 No alias Pentatricopeptide repeat-containing protein DOT4,... 0.05 Archaeplastida
Gb_07638 No alias Pentatricopeptide repeat-containing protein At4g21300... 0.06 Archaeplastida
Gb_08862 No alias Pentatricopeptide repeat-containing protein At3g03580... 0.06 Archaeplastida
Gb_09146 No alias Pentatricopeptide repeat-containing protein At3g03580... 0.06 Archaeplastida
Gb_09382 No alias Putative pentatricopeptide repeat-containing protein... 0.06 Archaeplastida
Gb_09793 No alias RNA editing factor (MEF7) 0.07 Archaeplastida
Gb_10713 No alias Pentatricopeptide repeat-containing protein DOT4,... 0.06 Archaeplastida
Gb_16328 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.06 Archaeplastida
Gb_17092 No alias RNA editing factor (OTP82) 0.05 Archaeplastida
Gb_17095 No alias Putative pentatricopeptide repeat-containing protein... 0.08 Archaeplastida
Gb_17294 No alias RNA editing factor (MEF3) 0.06 Archaeplastida
Gb_17295 No alias Pentatricopeptide repeat-containing protein At3g57430,... 0.05 Archaeplastida
Gb_17620 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 Archaeplastida
Gb_18986 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.05 Archaeplastida
Gb_21237 No alias Putative pentatricopeptide repeat-containing protein... 0.06 Archaeplastida
Gb_21270 No alias Pentatricopeptide repeat-containing protein DOT4,... 0.06 Archaeplastida
Gb_21442 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.05 Archaeplastida
Gb_23320 No alias RNA editing factor (OTP82) 0.06 Archaeplastida
Gb_26694 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.06 Archaeplastida
Gb_27176 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 Archaeplastida
Gb_27381 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.05 Archaeplastida
Gb_27462 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.06 Archaeplastida
Gb_28390 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.07 Archaeplastida
Gb_29543 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.05 Archaeplastida
Gb_30146 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.06 Archaeplastida
Gb_31498 No alias RNA editing factor (MEF19) 0.07 Archaeplastida
Gb_31546 No alias RNA editing factor (MEF3) 0.06 Archaeplastida
Gb_32452 No alias Pentatricopeptide repeat-containing protein At3g03580... 0.04 Archaeplastida
Gb_33537 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.06 Archaeplastida
Gb_34248 No alias RNA editing factor (OTP82) 0.07 Archaeplastida
Gb_34963 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.06 Archaeplastida
Gb_35886 No alias Pentatricopeptide repeat-containing protein DOT4,... 0.05 Archaeplastida
Gb_36260 No alias Pentatricopeptide repeat-containing protein At1g09410,... 0.06 Archaeplastida
Gb_36636 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.06 Archaeplastida
Gb_37254 No alias Pentatricopeptide repeat-containing protein At3g63370,... 0.06 Archaeplastida
Gb_37572 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.08 Archaeplastida
Gb_37802 No alias Pentatricopeptide repeat-containing protein At2g33680... 0.06 Archaeplastida
Gb_38068 No alias RNA editing factor (OTP82) 0.05 Archaeplastida
Gb_38441 No alias Pentatricopeptide repeat-containing protein At3g57430,... 0.1 Archaeplastida
Gb_38751 No alias Putative pentatricopeptide repeat-containing protein... 0.05 Archaeplastida
Gb_41234 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.07 Archaeplastida
LOC_Os03g04390.1 No alias Pentatricopeptide repeat-containing protein At4g35130,... 0.03 Archaeplastida
LOC_Os03g63260.3 No alias Putative pentatricopeptide repeat-containing protein... 0.05 Archaeplastida
LOC_Os08g25280.1 No alias Pentatricopeptide repeat-containing protein At4g39530... 0.04 Archaeplastida
MA_101084g0010 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.03 Archaeplastida
MA_103698g0030 No alias Putative pentatricopeptide repeat-containing protein... 0.05 Archaeplastida
MA_10429371g0010 No alias Pentatricopeptide repeat-containing protein At3g57430,... 0.04 Archaeplastida
MA_10430355g0010 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.06 Archaeplastida
MA_10432670g0020 No alias Putative pentatricopeptide repeat-containing protein... 0.08 Archaeplastida
MA_104937g0010 No alias Pentatricopeptide repeat-containing protein At2g03880,... 0.05 Archaeplastida
MA_107356g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.03 Archaeplastida
MA_109134g0010 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.03 Archaeplastida
MA_110g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.08 Archaeplastida
MA_115669g0020 No alias Pentatricopeptide repeat-containing protein DOT4,... 0.05 Archaeplastida
MA_116442g0010 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.03 Archaeplastida
MA_122899g0010 No alias Pentatricopeptide repeat-containing protein At3g57430,... 0.03 Archaeplastida
MA_124868g0020 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.06 Archaeplastida
MA_131437g0010 No alias RNA editing factor (MEF3) 0.03 Archaeplastida
MA_131g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 Archaeplastida
MA_136188g0010 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.03 Archaeplastida
MA_140591g0010 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.05 Archaeplastida
MA_16823g0010 No alias RNA editing factor (MEF19) 0.03 Archaeplastida
MA_16917g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.05 Archaeplastida
MA_174226g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.06 Archaeplastida
MA_18165g0010 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.03 Archaeplastida
MA_18383g0010 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.03 Archaeplastida
MA_185098g0010 No alias Pentatricopeptide repeat-containing protein At3g49170,... 0.03 Archaeplastida
MA_187514g0010 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.04 Archaeplastida
MA_19715g0020 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.09 Archaeplastida
MA_215359g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.06 Archaeplastida
MA_230261g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.06 Archaeplastida
MA_24849g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 Archaeplastida
MA_25515g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 Archaeplastida
MA_27147g0010 No alias Pentatricopeptide repeat-containing protein At3g49170,... 0.03 Archaeplastida
MA_28390g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 Archaeplastida
MA_285318g0010 No alias Pentatricopeptide repeat-containing protein DOT4,... 0.03 Archaeplastida
MA_291996g0010 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.05 Archaeplastida
MA_2991g0010 No alias RNA editing factor (MEF12) 0.04 Archaeplastida
MA_322292g0010 No alias Pentatricopeptide repeat-containing protein DOT4,... 0.06 Archaeplastida
MA_3471g0010 No alias RNA editing factor (MEF19) 0.03 Archaeplastida
MA_3502g0010 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.03 Archaeplastida
MA_385322g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.07 Archaeplastida
MA_392600g0010 No alias Pentatricopeptide repeat-containing protein At3g03580... 0.08 Archaeplastida
MA_41676g0020 No alias Pentatricopeptide repeat-containing protein At3g24000,... 0.04 Archaeplastida
MA_43727g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.03 Archaeplastida
MA_46875g0010 No alias Pentatricopeptide repeat-containing protein At1g20230... 0.06 Archaeplastida
MA_470025g0010 No alias Pentatricopeptide repeat-containing protein At3g57430,... 0.07 Archaeplastida
MA_472579g0010 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.07 Archaeplastida
MA_49545g0010 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.06 Archaeplastida
MA_49629g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 Archaeplastida
MA_502206g0010 No alias Pentatricopeptide repeat-containing protein At1g20230... 0.05 Archaeplastida
MA_50789g0010 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.04 Archaeplastida
MA_511569g0010 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.03 Archaeplastida
MA_52613g0020 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.1 Archaeplastida
MA_5481g0010 No alias Pentatricopeptide repeat-containing protein DOT4,... 0.04 Archaeplastida
MA_60579g0010 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.12 Archaeplastida
MA_61422g0020 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.05 Archaeplastida
MA_63139g0020 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.06 Archaeplastida
MA_653417g0010 No alias Pentatricopeptide repeat-containing protein At3g57430,... 0.03 Archaeplastida
MA_65500g0010 No alias Pentatricopeptide repeat-containing protein At1g08070,... 0.11 Archaeplastida
MA_66417g0010 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.04 Archaeplastida
MA_70677g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_73895g0010 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.11 Archaeplastida
MA_742g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.03 Archaeplastida
MA_75133g0010 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.03 Archaeplastida
MA_77437g0010 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.04 Archaeplastida
MA_77675g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.05 Archaeplastida
MA_794605g0010 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.07 Archaeplastida
MA_81105g0010 No alias RNA editing factor (OTP82) 0.12 Archaeplastida
MA_8210920g0010 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.04 Archaeplastida
MA_8319g0010 No alias Pentatricopeptide repeat-containing protein At3g24000,... 0.13 Archaeplastida
MA_84538g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.06 Archaeplastida
MA_86739g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 Archaeplastida
MA_87646g0010 No alias RNA editing factor (MEF13) 0.03 Archaeplastida
MA_8868720g0010 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.03 Archaeplastida
MA_89214g0010 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.03 Archaeplastida
MA_90090g0010 No alias Pentatricopeptide repeat-containing protein At4g39530... 0.03 Archaeplastida
MA_9354530g0010 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.04 Archaeplastida
MA_9384g0020 No alias Pentatricopeptide repeat-containing protein At3g49170,... 0.05 Archaeplastida
MA_944980g0010 No alias Pentatricopeptide repeat-containing protein At3g57430,... 0.08 Archaeplastida
MA_953793g0020 No alias Pentatricopeptide repeat-containing protein DOT4,... 0.05 Archaeplastida
MA_95507g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 Archaeplastida
MA_958908g0010 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.03 Archaeplastida
MA_961981g0010 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.04 Archaeplastida
MA_98224g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.06 Archaeplastida
Smo34426 No alias Pentatricopeptide repeat-containing protein At4g14820... 0.03 Archaeplastida
Smo79457 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.03 Archaeplastida
Solyc06g035600.3.1 No alias Pentatricopeptide repeat-containing protein At2g22410,... 0.05 Archaeplastida
Zm00001e003284_P001 No alias Putative pentatricopeptide repeat-containing protein... 0.03 Archaeplastida
Zm00001e005246_P001 No alias Pentatricopeptide repeat-containing protein At2g41080... 0.05 Archaeplastida
Zm00001e011748_P001 No alias Pentatricopeptide repeat-containing protein At4g21065... 0.03 Archaeplastida
Zm00001e015727_P001 No alias Pentatricopeptide repeat-containing protein At5g66520... 0.03 Archaeplastida
Zm00001e016923_P001 No alias Pentatricopeptide repeat-containing protein At3g46790,... 0.03 Archaeplastida
Zm00001e030887_P001 No alias Putative pentatricopeptide repeat-containing protein... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR032867 DYW_dom 657 781
IPR002885 Pentatricopeptide_repeat 132 157
IPR002885 Pentatricopeptide_repeat 559 582
IPR002885 Pentatricopeptide_repeat 159 184
IPR002885 Pentatricopeptide_repeat 625 653
IPR002885 Pentatricopeptide_repeat 484 530
IPR002885 Pentatricopeptide_repeat 282 328
IPR002885 Pentatricopeptide_repeat 383 430
No external refs found!