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  5. Gb_23286

Gb_23286


Description : 3-dehydrosphinganine reductase TSC10A OS=Arabidopsis thaliana (sp|q0wrj2|tc10a_arath : 142.0) & Enzyme classification.EC_1 oxidoreductases.EC_1.1 oxidoreductase acting on CH-OH group of donor(50.1.1 : 40.6)


Gene families : OG0000553 (Archaeplastida) Phylogenetic Tree(s): OG0000553_tree ,
OG_05_0000993 (LandPlants) Phylogenetic Tree(s): OG_05_0000993_tree ,
OG_06_0027878 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_23286
Cluster HCCA: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
Gb_10045 No alias no hits & (original description: none) 0.07 Archaeplastida
Gb_16076 No alias ketosphinganine reductase 0.07 Archaeplastida
Gb_18259 No alias 3-dehydrosphinganine reductase TSC10A OS=Arabidopsis... 0.03 Archaeplastida
Gb_18262 No alias 3-dehydrosphinganine reductase TSC10A OS=Arabidopsis... 0.03 Archaeplastida
Gb_36220 No alias 3-dehydrosphinganine reductase TSC10A OS=Arabidopsis... 0.07 Archaeplastida
LOC_Os02g47350.1 No alias ketosphinganine reductase 0.02 Archaeplastida
MA_10216834g0010 No alias 3-dehydrosphinganine reductase TSC10A OS=Arabidopsis... 0.05 Archaeplastida
MA_10429041g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_115712g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
MA_134891g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_29607g0010 No alias 3-dehydrosphinganine reductase TSC10A OS=Arabidopsis... 0.04 Archaeplastida
MA_494509g0010 No alias 3-dehydrosphinganine reductase TSC10A OS=Arabidopsis... 0.02 Archaeplastida
MA_66037g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_681548g0010 No alias 3-dehydrosphinganine reductase TSC10B OS=Arabidopsis... 0.04 Archaeplastida
MA_776612g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_88060g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_9332825g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
Mp8g15520.1 No alias 3-dehydrosphinganine reductase TSC10A OS=Arabidopsis... 0.02 Archaeplastida
Pp3c10_24980V3.1 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.05 Archaeplastida
Pp3c22_10520V3.1 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.03 Archaeplastida
Pp3c23_10340V3.1 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.02 Archaeplastida
Pp3c24_3340V3.1 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006334 nucleosome assembly IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0034728 nucleosome organization IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
BP GO:0065004 protein-DNA complex assembly IEP Neighborhood
BP GO:0071824 protein-DNA complex subunit organization IEP Neighborhood
InterPro domains Description Start Stop
IPR002347 SDR_fam 49 244
No external refs found!