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  5. Gb_23290

Gb_23290


Description : starch debranching enzyme. starch-debranching isoamylase-type enzyme


Gene families : OG0001068 (Archaeplastida) Phylogenetic Tree(s): OG0001068_tree ,
OG_05_0007530 (LandPlants) Phylogenetic Tree(s): OG_05_0007530_tree ,
OG_06_0010693 (SeedPlants) Phylogenetic Tree(s): OG_06_0010693_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_23290
Cluster HCCA: Cluster_219

Target Alias Description ECC score Gene Family Method Actions
AT1G03310 DBE1, ATISA2, BE2, ISA2 debranching enzyme 1 0.04 Archaeplastida
AT4G09020 ATISA3, ISA3 isoamylase 3 0.09 Archaeplastida
Cpa|evm.model.tig00020703.36 No alias Carbohydrate metabolism.starch... 0.03 Archaeplastida
Cpa|evm.model.tig00021589.4 No alias Carbohydrate metabolism.starch... 0.01 Archaeplastida
Cre03.g207713 No alias Carbohydrate metabolism.starch... 0.01 Archaeplastida
LOC_Os05g32710.1 No alias starch debranching enzyme. starch-debranching... 0.03 Archaeplastida
MA_10431226g0020 No alias starch debranching enzyme. starch-debranching... 0.02 Archaeplastida
Pp3c8_12820V3.1 No alias debranching enzyme 1 0.03 Archaeplastida
Solyc07g014590.4.1 No alias starch debranching enzyme. starch-debranching... 0.04 Archaeplastida
Solyc09g064800.3.1 No alias starch debranching enzyme. starch-debranching... 0.02 Archaeplastida
Zm00001e021910_P001 No alias starch debranching enzyme. starch-debranching... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Neighborhood
MF GO:0004645 phosphorylase activity IEP Neighborhood
MF GO:0008184 glycogen phosphorylase activity IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
BP GO:0035556 intracellular signal transduction IEP Neighborhood
InterPro domains Description Start Stop
IPR006047 Glyco_hydro_13_cat_dom 425 549
IPR004193 Glyco_hydro_13_N 265 357
No external refs found!