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Gb_23451


Description : Putative UPF0481 protein At3g02645 OS=Arabidopsis thaliana (sp|p0c897|y3264_arath : 80.9)


Gene families : OG0000473 (Archaeplastida) Phylogenetic Tree(s): OG0000473_tree ,
OG_05_0000246 (LandPlants) Phylogenetic Tree(s): OG_05_0000246_tree ,
OG_06_0000179 (SeedPlants) Phylogenetic Tree(s): OG_06_0000179_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_23451
Cluster HCCA: Cluster_86

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00033p00170840 evm_27.TU.AmTr_v1... Putative UPF0481 protein At3g02645 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00033p00171210 evm_27.TU.AmTr_v1... Putative UPF0481 protein At3g02645 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01017512001 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_03494 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_34674 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Gb_37283 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_10435738g0010 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.02 Archaeplastida
MA_10436979g0010 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.04 Archaeplastida
MA_120951g0020 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_8102365g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc03g117260.2.1 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e014020_P001 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e036342_P001 No alias Putative UPF0481 protein At3g02645 OS=Arabidopsis... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0009143 nucleoside triphosphate catabolic process IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
BP GO:0034404 nucleobase-containing small molecule biosynthetic process IEP Neighborhood
BP GO:0034655 nucleobase-containing compound catabolic process IEP Neighborhood
BP GO:0046434 organophosphate catabolic process IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0047429 nucleoside-triphosphate diphosphatase activity IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
BP GO:1901292 nucleoside phosphate catabolic process IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR004158 DUF247_pln 32 186
No external refs found!