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Description : Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum (sp|p10978|polx_tobac : 152.0)
Gene families : OG0000054 (Archaeplastida) Phylogenetic Tree(s): OG0000054_tree ,
OG_05_0007435 (LandPlants) Phylogenetic Tree(s): OG_05_0007435_tree ,
OG_06_0000040 (SeedPlants) Phylogenetic Tree(s): OG_06_0000040_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Gb_23452 | |
| Cluster | HCCA: Cluster_105 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cre03.g183950 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.02 | Archaeplastida | |
| Gb_03181 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.06 | Archaeplastida | |
| Gb_04745 | No alias | Retrovirus-related Pol polyprotein from transposon RE2... | 0.05 | Archaeplastida | |
| Gb_05895 | No alias | Retrovirus-related Pol polyprotein from transposon RE1... | 0.03 | Archaeplastida | |
| Gb_05914 | No alias | Retrovirus-related Pol polyprotein from transposon RE2... | 0.11 | Archaeplastida | |
| Gb_08011 | No alias | Retrovirus-related Pol polyprotein from transposon RE1... | 0.03 | Archaeplastida | |
| Gb_10172 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.15 | Archaeplastida | |
| Gb_18985 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.08 | Archaeplastida | |
| Gb_19106 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.07 | Archaeplastida | |
| Gb_21340 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.03 | Archaeplastida | |
| Gb_23035 | No alias | Retrovirus-related Pol polyprotein from transposon RE1... | 0.08 | Archaeplastida | |
| Gb_25298 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.03 | Archaeplastida | |
| Gb_26797 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.13 | Archaeplastida | |
| Gb_29064 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.15 | Archaeplastida | |
| Gb_30542 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.11 | Archaeplastida | |
| Gb_31472 | No alias | Retrovirus-related Pol polyprotein from transposon TNT... | 0.03 | Archaeplastida | |
| Gb_32087 | No alias | Retrovirus-related Pol polyprotein from transposon RE1... | 0.04 | Archaeplastida | |
| Pp3c3_31930V3.1 | No alias | No annotation | 0.02 | Archaeplastida | |
| Solyc06g150112.1.1 | No alias | No annotation | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0006259 | DNA metabolic process | IEP | Neighborhood |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Neighborhood |
| BP | GO:0015074 | DNA integration | IEP | Neighborhood |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Neighborhood |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Neighborhood |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR013103 | RVT_2 | 1 | 152 |
| No external refs found! |