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  5. AT2G37080

AT2G37080 (RIP3)


Aliases : RIP3

Description : ROP interactive partner 3


Gene families : OG0007526 (Archaeplastida) Phylogenetic Tree(s): OG0007526_tree ,
OG_05_0005600 (LandPlants) Phylogenetic Tree(s): OG_05_0005600_tree ,
OG_06_0003617 (SeedPlants) Phylogenetic Tree(s): OG_06_0003617_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G37080
Cluster HCCA: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
LOC_Os05g03120.2 No alias GTPase effector (RIP) 0.04 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0000911 cytokinesis by cell plate formation RCA Interproscan
CC GO:0009507 chloroplast IDA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP Neighborhood
BP GO:0000706 meiotic DNA double-strand break processing IEP Neighborhood
BP GO:0000729 DNA double-strand break processing IEP Neighborhood
CC GO:0000808 origin recognition complex IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006260 DNA replication IEP Neighborhood
BP GO:0006304 DNA modification IEP Neighborhood
BP GO:0006305 DNA alkylation IEP Neighborhood
BP GO:0006306 DNA methylation IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006342 chromatin silencing IEP Neighborhood
BP GO:0006986 response to unfolded protein IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0007276 gamete generation IEP Neighborhood
BP GO:0008283 cell proliferation IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0009292 genetic transfer IEP Neighborhood
BP GO:0009294 DNA mediated transformation IEP Neighborhood
CC GO:0009527 plastid outer membrane IEP Neighborhood
BP GO:0009566 fertilization IEP Neighborhood
BP GO:0009567 double fertilization forming a zygote and endosperm IEP Neighborhood
CC GO:0009707 chloroplast outer membrane IEP Neighborhood
BP GO:0009799 specification of symmetry IEP Neighborhood
BP GO:0009855 determination of bilateral symmetry IEP Neighborhood
BP GO:0009913 epidermal cell differentiation IEP Neighborhood
BP GO:0009957 epidermal cell fate specification IEP Neighborhood
CC GO:0010369 chromocenter IEP Neighborhood
MF GO:0010385 double-stranded methylated DNA binding IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
BP GO:0018022 peptidyl-lysine methylation IEP Neighborhood
BP GO:0030855 epithelial cell differentiation IEP Neighborhood
BP GO:0031047 gene silencing by RNA IEP Neighborhood
BP GO:0034605 cellular response to heat IEP Neighborhood
BP GO:0034620 cellular response to unfolded protein IEP Neighborhood
CC GO:0034708 methyltransferase complex IEP Neighborhood
BP GO:0034968 histone lysine methylation IEP Neighborhood
CC GO:0035097 histone methyltransferase complex IEP Neighborhood
BP GO:0035967 cellular response to topologically incorrect protein IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
BP GO:0044728 DNA methylation or demethylation IEP Neighborhood
BP GO:0044764 multi-organism cellular process IEP Neighborhood
BP GO:0045814 negative regulation of gene expression, epigenetic IEP Neighborhood
BP GO:0046685 response to arsenic-containing substance IEP Neighborhood
CC GO:0048188 Set1C/COMPASS complex IEP Neighborhood
BP GO:0048449 floral organ formation IEP Neighborhood
BP GO:0051567 histone H3-K9 methylation IEP Neighborhood
BP GO:0061647 histone H3-K9 modification IEP Neighborhood
BP GO:0070417 cellular response to cold IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
CC GO:0098687 chromosomal region IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1905393 plant organ formation IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!