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  5. Gb_23550

Gb_23550


Description : no hits & (original description: none)


Gene families : OG0000001 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0002017 (LandPlants) Phylogenetic Tree(s): OG_05_0002017_tree ,
OG_06_0001458 (SeedPlants) Phylogenetic Tree(s): OG_06_0001458_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_23550
Cluster HCCA: Cluster_23

Target Alias Description ECC score Gene Family Method Actions
ATMG00860 ORF158 DNA/RNA polymerases superfamily protein 0.04 Archaeplastida
ChrSy.fgenesh.mRNA.12 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.05 Archaeplastida
ChrSy.fgenesh.mRNA.17 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.03 Archaeplastida
ChrSy.fgenesh.mRNA.38 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.03 Archaeplastida
ChrSy.fgenesh.mRNA.55 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.05 Archaeplastida
ChrSy.fgenesh.mRNA.61 No alias Uncharacterized mitochondrial protein AtMg00860... 0.04 Archaeplastida
ChrSy.fgenesh.mRNA.62 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.04 Archaeplastida
ChrUn.fgenesh.mRNA.12 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.03 Archaeplastida
ChrUn.fgenesh.mRNA.15 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.03 Archaeplastida
ChrUn.fgenesh.mRNA.51 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.03 Archaeplastida
ChrUn.fgenesh.mRNA.88 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.03 Archaeplastida
Gb_00684 No alias Uncharacterized mitochondrial protein AtMg00860... 0.1 Archaeplastida
Gb_02281 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.07 Archaeplastida
Gb_02835 No alias no hits & (original description: none) 0.06 Archaeplastida
Gb_03156 No alias Uncharacterized mitochondrial protein AtMg00860... 0.08 Archaeplastida
Gb_03960 No alias no hits & (original description: none) 0.05 Archaeplastida
Gb_03978 No alias no hits & (original description: none) 0.06 Archaeplastida
Gb_04560 No alias no hits & (original description: none) 0.05 Archaeplastida
Gb_09554 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.12 Archaeplastida
Gb_09706 No alias no hits & (original description: none) 0.07 Archaeplastida
Gb_10189 No alias Uncharacterized mitochondrial protein AtMg00860... 0.11 Archaeplastida
Gb_13328 No alias no hits & (original description: none) 0.15 Archaeplastida
Gb_14590 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.05 Archaeplastida
Gb_14609 No alias Uncharacterized mitochondrial protein AtMg00860... 0.05 Archaeplastida
Gb_15436 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.05 Archaeplastida
Gb_16342 No alias Uncharacterized mitochondrial protein AtMg00860... 0.25 Archaeplastida
Gb_17315 No alias Uncharacterized mitochondrial protein AtMg00860... 0.06 Archaeplastida
Gb_17590 No alias Uncharacterized mitochondrial protein AtMg00860... 0.05 Archaeplastida
Gb_17670 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.07 Archaeplastida
Gb_18223 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.07 Archaeplastida
Gb_18576 No alias no hits & (original description: none) 0.18 Archaeplastida
Gb_18703 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.05 Archaeplastida
Gb_18747 No alias Uncharacterized mitochondrial protein AtMg00860... 0.1 Archaeplastida
Gb_20325 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.07 Archaeplastida
Gb_21108 No alias Uncharacterized mitochondrial protein AtMg00860... 0.1 Archaeplastida
Gb_21346 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.06 Archaeplastida
Gb_21943 No alias Uncharacterized mitochondrial protein AtMg00860... 0.09 Archaeplastida
Gb_23067 No alias no hits & (original description: none) 0.06 Archaeplastida
Gb_23709 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.06 Archaeplastida
Gb_24142 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.08 Archaeplastida
Gb_25344 No alias Uncharacterized mitochondrial protein AtMg00860... 0.29 Archaeplastida
Gb_27104 No alias no hits & (original description: none) 0.08 Archaeplastida
Gb_30072 No alias Uncharacterized mitochondrial protein AtMg00860... 0.06 Archaeplastida
Gb_30122 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.13 Archaeplastida
Gb_30475 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.13 Archaeplastida
Gb_30888 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.15 Archaeplastida
Gb_30891 No alias no hits & (original description: none) 0.05 Archaeplastida
Gb_32815 No alias no hits & (original description: none) 0.06 Archaeplastida
Gb_33106 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.15 Archaeplastida
Gb_33301 No alias Uncharacterized mitochondrial protein AtMg00860... 0.11 Archaeplastida
Gb_34528 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.04 Archaeplastida
Gb_36303 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.18 Archaeplastida
Gb_36546 No alias Uncharacterized mitochondrial protein AtMg00860... 0.1 Archaeplastida
Gb_36965 No alias no hits & (original description: none) 0.15 Archaeplastida
Gb_37445 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.05 Archaeplastida
Gb_38708 No alias Uncharacterized mitochondrial protein AtMg00860... 0.14 Archaeplastida
Gb_40215 No alias RNA-directed DNA polymerase homolog OS=Oenothera... 0.08 Archaeplastida
Solyc06g033787.1.1 No alias no hits & (original description: none) 0.05 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0015074 DNA integration IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004519 endonuclease activity IEP Neighborhood
MF GO:0004521 endoribonuclease activity IEP Neighborhood
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Neighborhood
MF GO:0004540 ribonuclease activity IEP Neighborhood
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Neighborhood
InterPro domains Description Start Stop
IPR001584 Integrase_cat-core 3 108
No external refs found!