Gb_23887


Description : component VPS2/CHMP2 of ESCRT-III complex


Gene families : OG0001089 (Archaeplastida) Phylogenetic Tree(s): OG0001089_tree ,
OG_05_0004324 (LandPlants) Phylogenetic Tree(s): OG_05_0004324_tree ,
OG_06_0004747 (SeedPlants) Phylogenetic Tree(s): OG_06_0004747_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_23887
Cluster HCCA: Cluster_206

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00151310 evm_27.TU.AmTr_v1... Vesicle trafficking.endomembrane trafficking.ESCRT... 0.02 Archaeplastida
AT2G06530 VPS2.1 SNF7 family protein 0.03 Archaeplastida
AT5G44560 VPS2.2 SNF7 family protein 0.02 Archaeplastida
Cpa|evm.model.tig00020510.41 No alias Vesicle trafficking.endomembrane trafficking.ESCRT... 0.03 Archaeplastida
Cre04.g213450 No alias Vesicle trafficking.endomembrane trafficking.ESCRT... 0.03 Archaeplastida
Cre17.g735400 No alias Vesicle trafficking.endomembrane trafficking.ESCRT... 0.05 Archaeplastida
MA_96110g0010 No alias component VPS2/CHMP2 of ESCRT-III complex 0.05 Archaeplastida
Solyc12g009060.2.1 No alias component VPS2/CHMP2 of ESCRT-III complex 0.03 Archaeplastida
Zm00001e009370_P001 No alias component VPS2/CHMP2 of ESCRT-III complex 0.03 Archaeplastida
Zm00001e033163_P001 No alias component VPS2/CHMP2 of ESCRT-III complex 0.07 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0007034 vacuolar transport IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0000813 ESCRT I complex IEP Neighborhood
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
BP GO:0016197 endosomal transport IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
BP GO:0032509 endosome transport via multivesicular body sorting pathway IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
CC GO:0036452 ESCRT complex IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044440 endosomal part IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
BP GO:0071985 multivesicular body sorting pathway IEP Neighborhood
InterPro domains Description Start Stop
IPR005024 Snf7_fam 17 194
No external refs found!