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  5. AT2G37470

AT2G37470


Description : Histone superfamily protein


Gene families : OG0000186 (Archaeplastida) Phylogenetic Tree(s): OG0000186_tree ,
OG_05_0000249 (LandPlants) Phylogenetic Tree(s): OG_05_0000249_tree ,
OG_06_0000187 (SeedPlants) Phylogenetic Tree(s): OG_06_0000187_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G37470
Cluster HCCA: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000944.18 No alias Chromatin organisation.histones.H2B-type histone 0.01 Archaeplastida
Cre06.g264900 No alias Chromatin organisation.histones.H2B-type histone 0.01 Archaeplastida
Cre06.g274250 No alias Chromatin organisation.histones.H2B-type histone 0.01 Archaeplastida
Cre06.g276550 No alias Chromatin organisation.histones.H2B-type histone 0.01 Archaeplastida
Cre12.g504700 No alias Chromatin organisation.histones.H2B-type histone 0.01 Archaeplastida
Cre12.g506200 No alias Chromatin organisation.histones.H2B-type histone 0.01 Archaeplastida
Cre13.g570050 No alias Chromatin organisation.histones.H2B-type histone 0.01 Archaeplastida
Cre17.g709150 No alias Chromatin organisation.histones.H2B-type histone 0.01 Archaeplastida
Cre17.g710450 No alias Chromatin organisation.histones.H2B-type histone 0.01 Archaeplastida
Cre17.g711750 No alias Chromatin organisation.histones.H2B-type histone 0.01 Archaeplastida
Cre17.g713450 No alias Chromatin organisation.histones.H2B-type histone 0.01 Archaeplastida
Cre17.g714050 No alias Chromatin organisation.histones.H2B-type histone 0.01 Archaeplastida
GSVIVT01016164001 No alias Chromatin organisation.histones.H2B-type histone 0.01 Archaeplastida
Gb_12096 No alias histone (H2B) 0.02 Archaeplastida
LOC_Os01g05900.1 No alias histone (H2B) 0.03 Archaeplastida
Pp3c12_7610V3.1 No alias Histone superfamily protein 0.01 Archaeplastida
Solyc02g038690.1.1 No alias histone (H2B) 0.02 Archaeplastida
Solyc06g074790.2.1 No alias histone (H2B) 0.02 Archaeplastida
Solyc11g007930.1.1 No alias histone (H2B) 0.02 Archaeplastida
Zm00001e020484_P002 No alias histone (H2B) 0.03 Archaeplastida
Zm00001e039057_P002 No alias histone (H2B) 0.04 Archaeplastida
Zm00001e041296_P001 No alias histone (H2B) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
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Type GO Term Name Evidence Source
BP GO:0000280 nuclear division IEP Neighborhood
BP GO:0000719 photoreactive repair IEP Neighborhood
CC GO:0000798 nuclear cohesin complex IEP Neighborhood
CC GO:0000808 origin recognition complex IEP Neighborhood
BP GO:0000911 cytokinesis by cell plate formation IEP Neighborhood
BP GO:0003006 developmental process involved in reproduction IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0003913 DNA photolyase activity IEP Neighborhood
MF GO:0004748 ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
CC GO:0005880 nuclear microtubule IEP Neighborhood
CC GO:0005887 integral component of plasma membrane IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006260 DNA replication IEP Neighborhood
BP GO:0006261 DNA-dependent DNA replication IEP Neighborhood
BP GO:0006290 pyrimidine dimer repair IEP Neighborhood
BP GO:0007051 spindle organization IEP Neighborhood
BP GO:0007130 synaptonemal complex assembly IEP Neighborhood
BP GO:0007349 cellularization IEP Neighborhood
BP GO:0008219 cell death IEP Neighborhood
CC GO:0008278 cohesin complex IEP Neighborhood
MF GO:0008474 palmitoyl-(protein) hydrolase activity IEP Neighborhood
MF GO:0008519 ammonium transmembrane transporter activity IEP Neighborhood
BP GO:0009186 deoxyribonucleoside diphosphate metabolic process IEP Neighborhood
BP GO:0009555 pollen development IEP Neighborhood
BP GO:0009566 fertilization IEP Neighborhood
BP GO:0009567 double fertilization forming a zygote and endosperm IEP Neighborhood
BP GO:0009650 UV protection IEP Neighborhood
BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
CC GO:0009898 cytoplasmic side of plasma membrane IEP Neighborhood
BP GO:0010098 suspensor development IEP Neighborhood
MF GO:0010175 sphingosine transmembrane transporter activity IEP Neighborhood
BP GO:0010212 response to ionizing radiation IEP Neighborhood
BP GO:0010332 response to gamma radiation IEP Neighborhood
BP GO:0010342 endosperm cellularization IEP Neighborhood
BP GO:0010466 negative regulation of peptidase activity IEP Neighborhood
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010951 negative regulation of endopeptidase activity IEP Neighborhood
MF GO:0015101 organic cation transmembrane transporter activity IEP Neighborhood
MF GO:0015166 polyol transmembrane transporter activity IEP Neighborhood
MF GO:0015204 urea transmembrane transporter activity IEP Neighborhood
MF GO:0015665 alcohol transmembrane transporter activity IEP Neighborhood
BP GO:0015840 urea transport IEP Neighborhood
BP GO:0016458 gene silencing IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
BP GO:0016572 histone phosphorylation IEP Neighborhood
MF GO:0016725 oxidoreductase activity, acting on CH or CH2 groups IEP Neighborhood
MF GO:0016728 oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor IEP Neighborhood
BP GO:0019755 one-carbon compound transport IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
BP GO:0022402 cell cycle process IEP Neighborhood
BP GO:0022412 cellular process involved in reproduction in multicellular organism IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
BP GO:0030154 cell differentiation IEP Neighborhood
BP GO:0030162 regulation of proteolysis IEP Neighborhood
BP GO:0031324 negative regulation of cellular metabolic process IEP Neighborhood
MF GO:0032442 phenylcoumaran benzylic ether reductase activity IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
BP GO:0032506 cytokinetic process IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
BP GO:0045861 negative regulation of proteolysis IEP Neighborhood
MF GO:0046624 sphingolipid transporter activity IEP Neighborhood
BP GO:0048235 pollen sperm cell differentiation IEP Neighborhood
BP GO:0048285 organelle fission IEP Neighborhood
BP GO:0048451 petal formation IEP Neighborhood
BP GO:0048453 sepal formation IEP Neighborhood
CC GO:0048555 generative cell nucleus IEP Neighborhood
BP GO:0048598 embryonic morphogenesis IEP Neighborhood
BP GO:0048869 cellular developmental process IEP Neighborhood
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051225 spindle assembly IEP Neighborhood
BP GO:0051346 negative regulation of hydrolase activity IEP Neighborhood
BP GO:0051726 regulation of cell cycle IEP Neighborhood
BP GO:0051865 protein autoubiquitination IEP Neighborhood
BP GO:0052547 regulation of peptidase activity IEP Neighborhood
BP GO:0052548 regulation of endopeptidase activity IEP Neighborhood
MF GO:0061731 ribonucleoside-diphosphate reductase activity IEP Neighborhood
BP GO:0070193 synaptonemal complex organization IEP Neighborhood
BP GO:0070925 organelle assembly IEP Neighborhood
BP GO:0080159 zygote elongation IEP Neighborhood
CC GO:0098552 side of membrane IEP Neighborhood
CC GO:0098562 cytoplasmic side of membrane IEP Neighborhood
MF GO:0098599 palmitoyl hydrolase activity IEP Neighborhood
BP GO:1902410 mitotic cytokinetic process IEP Neighborhood
BP GO:1903047 mitotic cell cycle process IEP Neighborhood
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 4 115
No external refs found!