1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT2G37620

AT2G37620 (AAc1, ACT1)


Aliases : AAc1, ACT1

Description : actin 1


Gene families : OG0000334 (Archaeplastida) Phylogenetic Tree(s): OG0000334_tree ,
OG_05_0000214 (LandPlants) Phylogenetic Tree(s): OG_05_0000214_tree ,
OG_06_0000153 (SeedPlants) Phylogenetic Tree(s): OG_06_0000153_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G37620
Cluster HCCA: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00018p00188200 evm_27.TU.AmTr_v1... Cytoskeleton.microfilament network.actin filament protein 0.03 Archaeplastida
AMTR_s00062p00184900 evm_27.TU.AmTr_v1... Cytoskeleton.microfilament network.actin filament protein 0.02 Archaeplastida
Cre13.g603700 No alias Cytoskeleton.microfilament network.actin filament protein 0.06 Archaeplastida
LOC_Os03g50885.1 No alias actin filament protein 0.03 Archaeplastida
LOC_Os05g01600.2 No alias actin filament protein 0.03 Archaeplastida
LOC_Os12g44350.1 No alias actin filament protein 0.05 Archaeplastida
MA_10427661g0030 No alias actin filament protein 0.05 Archaeplastida
MA_10430339g0010 No alias actin filament protein 0.02 Archaeplastida
MA_135063g0010 No alias actin filament protein 0.02 Archaeplastida
Mp6g10990.1 No alias actin filament protein 0.02 Archaeplastida
Mp6g11010.1 No alias actin filament protein 0.02 Archaeplastida
Pp3c3_33440V3.1 No alias actin 7 0.02 Archaeplastida
Solyc05g054480.3.1 No alias actin filament protein 0.05 Archaeplastida
Solyc10g086460.2.1 No alias actin filament protein 0.03 Archaeplastida
Zm00001e005489_P002 No alias actin filament protein 0.04 Archaeplastida
Zm00001e009080_P001 No alias actin filament protein 0.07 Archaeplastida
Zm00001e012159_P001 No alias actin filament protein 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005200 structural constituent of cytoskeleton ISS Interproscan
CC GO:0005618 cell wall IDA Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
CC GO:0005829 cytosol IDA Interproscan
CC GO:0005856 cytoskeleton TAS Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
BP GO:0007010 cytoskeleton organization TAS Interproscan
CC GO:0009506 plasmodesma IDA Interproscan
BP GO:0048589 developmental growth IMP Interproscan
BP GO:0048767 root hair elongation IMP Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Neighborhood
BP GO:0000902 cell morphogenesis IEP Neighborhood
BP GO:0000904 cell morphogenesis involved in differentiation IEP Neighborhood
BP GO:0003006 developmental process involved in reproduction IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
MF GO:0004683 calmodulin-dependent protein kinase activity IEP Neighborhood
MF GO:0005092 GDP-dissociation inhibitor activity IEP Neighborhood
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP Neighborhood
CC GO:0005622 intracellular IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0005884 actin filament IEP Neighborhood
CC GO:0005938 cell cortex IEP Neighborhood
BP GO:0006904 vesicle docking involved in exocytosis IEP Neighborhood
BP GO:0009653 anatomical structure morphogenesis IEP Neighborhood
BP GO:0009664 plant-type cell wall organization IEP Neighborhood
BP GO:0009826 unidimensional cell growth IEP Neighborhood
BP GO:0009827 plant-type cell wall modification IEP Neighborhood
BP GO:0009860 pollen tube growth IEP Neighborhood
BP GO:0009865 pollen tube adhesion IEP Neighborhood
BP GO:0009932 cell tip growth IEP Neighborhood
BP GO:0010191 mucilage metabolic process IEP Neighborhood
BP GO:0010192 mucilage biosynthetic process IEP Neighborhood
BP GO:0010214 seed coat development IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0017048 Rho GTPase binding IEP Neighborhood
BP GO:0022406 membrane docking IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
CC GO:0030133 transport vesicle IEP Neighborhood
MF GO:0030695 GTPase regulator activity IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
BP GO:0032989 cellular component morphogenesis IEP Neighborhood
BP GO:0035023 regulation of Rho protein signal transduction IEP Neighborhood
BP GO:0035024 negative regulation of Rho protein signal transduction IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
CC GO:0042995 cell projection IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
BP GO:0044703 multi-organism reproductive process IEP Neighborhood
CC GO:0045177 apical part of cell IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
BP GO:0046578 regulation of Ras protein signal transduction IEP Neighborhood
BP GO:0046580 negative regulation of Ras protein signal transduction IEP Neighborhood
BP GO:0048278 vesicle docking IEP Neighborhood
BP GO:0048354 mucilage biosynthetic process involved in seed coat development IEP Neighborhood
BP GO:0048359 mucilage metabolic process involved in seed coat development IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
BP GO:0048868 pollen tube development IEP Neighborhood
BP GO:0048869 cellular developmental process IEP Neighborhood
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP Neighborhood
BP GO:0051058 negative regulation of small GTPase mediated signal transduction IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood
CC GO:0070382 exocytic vesicle IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
BP GO:0071669 plant-type cell wall organization or biogenesis IEP Neighborhood
CC GO:0090406 pollen tube IEP Neighborhood
BP GO:0098609 cell-cell adhesion IEP Neighborhood
BP GO:0098740 multi organism cell adhesion IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
CC GO:0099080 supramolecular complex IEP Neighborhood
CC GO:0099081 supramolecular polymer IEP Neighborhood
CC GO:0099503 secretory vesicle IEP Neighborhood
CC GO:0099512 supramolecular fiber IEP Neighborhood
CC GO:0099513 polymeric cytoskeletal fiber IEP Neighborhood
CC GO:0099568 cytoplasmic region IEP Neighborhood
CC GO:0120025 plasma membrane bounded cell projection IEP Neighborhood
BP GO:0140029 exocytic process IEP Neighborhood
BP GO:0140056 organelle localization by membrane tethering IEP Neighborhood
BP GO:1902531 regulation of intracellular signal transduction IEP Neighborhood
BP GO:1902532 negative regulation of intracellular signal transduction IEP Neighborhood
InterPro domains Description Start Stop
IPR004000 Actin 5 377
No external refs found!