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  5. AT2G37925

AT2G37925 (COPT4)


Aliases : COPT4

Description : copper transporter 4


Gene families : OG0000928 (Archaeplastida) Phylogenetic Tree(s): OG0000928_tree ,
OG_05_0004459 (LandPlants) Phylogenetic Tree(s): OG_05_0004459_tree ,
OG_06_0002871 (SeedPlants) Phylogenetic Tree(s): OG_06_0002871_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G37925
Cluster HCCA: Cluster_113

Target Alias Description ECC score Gene Family Method Actions
AT5G59040 COPT3 copper transporter 3 0.03 Archaeplastida
Gb_22347 No alias copper cation channel (COPT). copper transporter (COPT) 0.03 Archaeplastida
LOC_Os04g33900.1 No alias copper cation channel (COPT). copper transporter (COPT) 0.04 Archaeplastida
LOC_Os09g26900.1 No alias copper cation channel (COPT). copper transporter (COPT) 0.03 Archaeplastida
Mp4g11240.1 No alias copper cation channel (COPT). copper transporter (COPT) 0.03 Archaeplastida
Solyc02g082080.1.1 No alias copper cation channel (COPT). copper transporter (COPT) 0.03 Archaeplastida
Solyc09g011665.1.1 No alias copper cation channel (COPT). copper transporter (COPT) 0.05 Archaeplastida
Solyc10g084980.3.1 No alias copper cation channel (COPT). copper transporter (COPT) 0.06 Archaeplastida
Zm00001e009889_P001 No alias copper cation channel (COPT). copper transporter (COPT) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005375 copper ion transmembrane transporter activity ISS Interproscan
BP GO:0006825 copper ion transport ISS Interproscan
MF GO:0015089 high-affinity copper ion transmembrane transporter activity IGI Interproscan
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Type GO Term Name Evidence Source
CC GO:0000322 storage vacuole IEP Neighborhood
CC GO:0000326 protein storage vacuole IEP Neighborhood
MF GO:0005372 water transmembrane transporter activity IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
CC GO:0005768 endosome IEP Neighborhood
CC GO:0005886 plasma membrane IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006598 polyamine catabolic process IEP Neighborhood
BP GO:0006649 phospholipid transfer to membrane IEP Neighborhood
BP GO:0006816 calcium ion transport IEP Neighborhood
BP GO:0006855 drug transmembrane transport IEP Neighborhood
BP GO:0007030 Golgi organization IEP Neighborhood
MF GO:0008134 transcription factor binding IEP Neighborhood
BP GO:0009269 response to desiccation IEP Neighborhood
CC GO:0009504 cell plate IEP Neighborhood
BP GO:0009740 gibberellic acid mediated signaling pathway IEP Neighborhood
BP GO:0009834 plant-type secondary cell wall biogenesis IEP Neighborhood
BP GO:0010383 cell wall polysaccharide metabolic process IEP Neighborhood
BP GO:0010410 hemicellulose metabolic process IEP Neighborhood
BP GO:0010413 glucuronoxylan metabolic process IEP Neighborhood
BP GO:0010476 gibberellin mediated signaling pathway IEP Neighborhood
MF GO:0015204 urea transmembrane transporter activity IEP Neighborhood
MF GO:0015250 water channel activity IEP Neighborhood
BP GO:0015840 urea transport IEP Neighborhood
BP GO:0015914 phospholipid transport IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016707 gibberellin 3-beta-dioxygenase activity IEP Neighborhood
BP GO:0019755 one-carbon compound transport IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
CC GO:0031410 cytoplasmic vesicle IEP Neighborhood
CC GO:0031982 vesicle IEP Neighborhood
BP GO:0042546 cell wall biogenesis IEP Neighborhood
CC GO:0042807 central vacuole IEP Neighborhood
BP GO:0042891 antibiotic transport IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
BP GO:0044038 cell wall macromolecule biosynthetic process IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
BP GO:0045491 xylan metabolic process IEP Neighborhood
BP GO:0045492 xylan biosynthetic process IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0051181 cofactor transport IEP Neighborhood
BP GO:0052541 plant-type cell wall cellulose metabolic process IEP Neighborhood
BP GO:0052546 cell wall pectin metabolic process IEP Neighborhood
BP GO:0070589 cellular component macromolecule biosynthetic process IEP Neighborhood
BP GO:0070592 cell wall polysaccharide biosynthetic process IEP Neighborhood
BP GO:0070838 divalent metal ion transport IEP Neighborhood
BP GO:0072511 divalent inorganic cation transport IEP Neighborhood
BP GO:0080170 hydrogen peroxide transmembrane transport IEP Neighborhood
CC GO:0097708 intracellular vesicle IEP Neighborhood
InterPro domains Description Start Stop
IPR007274 Cop_transporter 92 134
IPR007274 Cop_transporter 33 75
No external refs found!