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  5. Gb_24488

Gb_24488


Description : 1,4-beta-glucan synthase (CSLC)


Gene families : OG0000194 (Archaeplastida) Phylogenetic Tree(s): OG0000194_tree ,
OG_05_0000643 (LandPlants) Phylogenetic Tree(s): OG_05_0000643_tree ,
OG_06_0000676 (SeedPlants) Phylogenetic Tree(s): OG_06_0000676_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_24488
Cluster HCCA: Cluster_108

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00171550 evm_27.TU.AmTr_v1... Cell wall.hemicellulose.xyloglucan.synthesis.CSLC-type... 0.02 Archaeplastida
AT1G23480 ATCSLA3, CSLA03,... cellulose synthase-like A3 0.05 Archaeplastida
AT2G24630 ATCSLC8, ATCSLC08, CSLC08 Glycosyl transferase family 2 protein 0.05 Archaeplastida
AT3G28180 ATCSLC04,... Cellulose-synthase-like C4 0.06 Archaeplastida
AT3G56000 ATCSLA14, CSLA14 cellulose synthase like A14 0.04 Archaeplastida
AT4G31590 ATCSLC05,... Cellulose-synthase-like C5 0.04 Archaeplastida
AT5G16190 CSLA11, ATCSLA11 cellulose synthase like A11 0.03 Archaeplastida
GSVIVT01009290001 No alias Cell wall.hemicellulose.xyloglucan.synthesis.CSLC-type... 0.02 Archaeplastida
GSVIVT01016135001 No alias Cell wall.hemicellulose.xyloglucan.synthesis.CSLC-type... 0.06 Archaeplastida
GSVIVT01031405001 No alias Cell wall.hemicellulose.heteromannan.synthesis.mannan... 0.07 Archaeplastida
GSVIVT01032523001 No alias Cell wall.hemicellulose.xyloglucan.synthesis.CSLC-type... 0.03 Archaeplastida
GSVIVT01033168001 No alias Cell wall.hemicellulose.xyloglucan.synthesis.CSLC-type... 0.1 Archaeplastida
GSVIVT01033767001 No alias Cell wall.hemicellulose.heteromannan.synthesis.mannan... 0.03 Archaeplastida
GSVIVT01034719001 No alias Cell wall.hemicellulose.heteromannan.synthesis.mannan... 0.03 Archaeplastida
Gb_04568 No alias 1,4-beta-glucan synthase (CSLC) 0.04 Archaeplastida
LOC_Os01g56130.1 No alias 1,4-beta-glucan synthase (CSLC) 0.03 Archaeplastida
LOC_Os02g09930.1 No alias mannan synthase (CSLA) 0.06 Archaeplastida
LOC_Os02g51060.1 No alias mannan synthase (CSLA) 0.02 Archaeplastida
LOC_Os05g43530.1 No alias 1,4-beta-glucan synthase (CSLC) 0.03 Archaeplastida
LOC_Os08g15420.1 No alias 1,4-beta-glucan synthase (CSLC) 0.04 Archaeplastida
LOC_Os09g25900.1 No alias 1,4-beta-glucan synthase (CSLC) 0.02 Archaeplastida
MA_10426467g0020 No alias Glucomannan 4-beta-mannosyltransferase 9 OS=Arabidopsis... 0.03 Archaeplastida
MA_10429365g0010 No alias 1,4-beta-glucan synthase (CSLC) 0.04 Archaeplastida
MA_449559g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_7990944g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_9381137g0010 No alias Probable xyloglucan glycosyltransferase 2 OS=Oryza... 0.04 Archaeplastida
MA_96942g0010 No alias mannan synthase (CSLA) 0.02 Archaeplastida
Mp1g22770.1 No alias mannan synthase (CSLA) 0.04 Archaeplastida
Pp3c14_13750V3.1 No alias Nucleotide-diphospho-sugar transferases superfamily protein 0.06 Archaeplastida
Pp3c16_14110V3.1 No alias Cellulose-synthase-like C5 0.02 Archaeplastida
Pp3c17_19630V3.1 No alias Nucleotide-diphospho-sugar transferases superfamily protein 0.02 Archaeplastida
Pp3c17_19670V3.1 No alias Nucleotide-diphospho-sugar transferases superfamily protein 0.04 Archaeplastida
Pp3c27_7220V3.1 No alias Cellulose-synthase-like C5 0.02 Archaeplastida
Smo140200 No alias Cell wall.hemicellulose.xyloglucan.synthesis.CSLC-type... 0.05 Archaeplastida
Smo230176 No alias Cell wall.hemicellulose.heteromannan.synthesis.mannan... 0.04 Archaeplastida
Smo442658 No alias Cell wall.hemicellulose.xyloglucan.synthesis.CSLC-type... 0.03 Archaeplastida
Solyc02g089640.3.1 No alias 1,4-beta-glucan synthase (CSLC) 0.03 Archaeplastida
Solyc04g077470.3.1 No alias 1,4-beta-glucan synthase (CSLC) 0.03 Archaeplastida
Solyc08g006310.3.1 No alias 1,4-beta-glucan synthase (CSLC) 0.05 Archaeplastida
Solyc10g083670.3.1 No alias mannan synthase (CSLA) 0.05 Archaeplastida
Solyc11g066820.2.1 No alias mannan synthase (CSLA) 0.05 Archaeplastida
Zm00001e015809_P002 No alias mannan synthase (CSLA) 0.02 Archaeplastida
Zm00001e019706_P002 No alias 1,4-beta-glucan synthase (CSLC) 0.02 Archaeplastida
Zm00001e021557_P001 No alias 1,4-beta-glucan synthase (CSLC) 0.03 Archaeplastida
Zm00001e022456_P001 No alias mannan synthase (CSLA) 0.01 Archaeplastida
Zm00001e025054_P003 No alias mannan synthase (CSLA) 0.04 Archaeplastida
Zm00001e028988_P001 No alias 1,4-beta-glucan synthase (CSLC) 0.03 Archaeplastida
Zm00001e030869_P002 No alias mannan synthase (CSLA) 0.02 Archaeplastida
Zm00001e032112_P001 No alias 1,4-beta-glucan synthase (CSLC) 0.03 Archaeplastida
Zm00001e034210_P001 No alias 1,4-beta-glucan synthase (CSLC) 0.04 Archaeplastida
Zm00001e039906_P001 No alias 1,4-beta-glucan synthase (CSLC) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Neighborhood
MF GO:0000976 transcription regulatory region sequence-specific DNA binding IEP Neighborhood
MF GO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding IEP Neighborhood
MF GO:0001012 RNA polymerase II regulatory region DNA binding IEP Neighborhood
MF GO:0001067 regulatory region nucleic acid binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0004664 prephenate dehydratase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006558 L-phenylalanine metabolic process IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0009094 L-phenylalanine biosynthetic process IEP Neighborhood
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Neighborhood
BP GO:0009250 glucan biosynthetic process IEP Neighborhood
BP GO:0010215 cellulose microfibril organization IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
BP GO:0016051 carbohydrate biosynthetic process IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016759 cellulose synthase activity IEP Neighborhood
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
BP GO:0030198 extracellular matrix organization IEP Neighborhood
BP GO:0030243 cellulose metabolic process IEP Neighborhood
BP GO:0030244 cellulose biosynthetic process IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
MF GO:0032422 purine-rich negative regulatory element binding IEP Neighborhood
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Neighborhood
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Neighborhood
MF GO:0035251 UDP-glucosyltransferase activity IEP Neighborhood
BP GO:0043062 extracellular structure organization IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
MF GO:0044212 transcription regulatory region DNA binding IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051273 beta-glucan metabolic process IEP Neighborhood
BP GO:0051274 beta-glucan biosynthetic process IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Neighborhood
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Neighborhood
MF GO:1990837 sequence-specific double-stranded DNA binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001173 Glyco_trans_2-like 320 525
No external refs found!