Description : Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana (sp|q9svp7|pp307_arath : 353.0)
Gene families : OG0000000 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000000 (LandPlants) Phylogenetic Tree(s): OG_05_0000000_tree ,
OG_06_0000000 (SeedPlants) Phylogenetic Tree(s): OG_06_0000000_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Gb_24633 | |
Cluster | HCCA: Cluster_324 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00002p00270380 | evm_27.TU.AmTr_v1... | RNA processing.organelle machineries.RNA... | 0.02 | Archaeplastida | |
AMTR_s00022p00075660 | No alias | Pentatricopeptide repeat-containing protein At2g33680... | 0.04 | Archaeplastida | |
AMTR_s00022p00127120 | evm_27.TU.AmTr_v1... | Pentatricopeptide repeat-containing protein At3g09040,... | 0.02 | Archaeplastida | |
GSVIVT01022894001 | No alias | Pentatricopeptide repeat-containing protein At1g20230... | 0.02 | Archaeplastida | |
GSVIVT01036788001 | No alias | Pentatricopeptide repeat-containing protein At4g13650... | 0.03 | Archaeplastida | |
Gb_17321 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.04 | Archaeplastida | |
Gb_26155 | No alias | Pentatricopeptide repeat-containing protein At3g46790,... | 0.04 | Archaeplastida | |
LOC_Os03g64370.1 | No alias | Pentatricopeptide repeat-containing protein At5g52850,... | 0.03 | Archaeplastida | |
LOC_Os04g49520.1 | No alias | Pentatricopeptide repeat-containing protein At2g22070... | 0.02 | Archaeplastida | |
MA_7907g0020 | No alias | Pentatricopeptide repeat-containing protein At3g57430,... | 0.08 | Archaeplastida | |
Pp3c17_23250V3.1 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Archaeplastida | |
Pp3c19_930V3.1 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.01 | Archaeplastida | |
Pp3c5_15090V3.1 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.01 | Archaeplastida | |
Smo100621 | No alias | Pentatricopeptide repeat-containing protein At2g13600... | 0.02 | Archaeplastida | |
Solyc07g008480.3.1 | No alias | Pentatricopeptide repeat-containing protein At3g14730... | 0.03 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003674 | molecular_function | IEP | Neighborhood |
MF | GO:0004386 | helicase activity | IEP | Neighborhood |
MF | GO:0005488 | binding | IEP | Neighborhood |
MF | GO:0008270 | zinc ion binding | IEP | Neighborhood |
MF | GO:0043167 | ion binding | IEP | Neighborhood |
MF | GO:0043169 | cation binding | IEP | Neighborhood |
MF | GO:0046872 | metal ion binding | IEP | Neighborhood |
MF | GO:0046914 | transition metal ion binding | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002885 | Pentatricopeptide_repeat | 75 | 122 |
IPR002885 | Pentatricopeptide_repeat | 173 | 218 |
IPR002885 | Pentatricopeptide_repeat | 273 | 321 |
IPR002885 | Pentatricopeptide_repeat | 349 | 374 |
IPR002885 | Pentatricopeptide_repeat | 450 | 477 |
IPR002885 | Pentatricopeptide_repeat | 49 | 74 |
IPR002885 | Pentatricopeptide_repeat | 377 | 406 |
No external refs found! |