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  5. Gb_24666

Gb_24666


Description : Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana (sp|q9sit7|pp151_arath : 528.0)


Gene families : OG0013909 (Archaeplastida) Phylogenetic Tree(s): OG0013909_tree ,
OG_05_0011972 (LandPlants) Phylogenetic Tree(s): OG_05_0011972_tree ,
OG_06_0012004 (SeedPlants) Phylogenetic Tree(s): OG_06_0012004_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_24666
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
MA_15061g0010 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.06 Archaeplastida
MA_5151g0020 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 241 287
IPR002885 Pentatricopeptide_repeat 140 187
IPR002885 Pentatricopeptide_repeat 474 522
IPR002885 Pentatricopeptide_repeat 372 420
IPR002885 Pentatricopeptide_repeat 338 369
IPR002885 Pentatricopeptide_repeat 548 572
No external refs found!