1. Home
  2. Species
  3. Gingko biloba
  4. Sequence
  5. Gb_24821

Gb_24821


Description : Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana (sp|q9sit7|pp151_arath : 429.0)


Gene families : OG0016275 (Archaeplastida) Phylogenetic Tree(s): OG0016275_tree ,
OG_05_0015817 (LandPlants) Phylogenetic Tree(s): OG_05_0015817_tree ,
OG_06_0015567 (SeedPlants) Phylogenetic Tree(s): OG_06_0015567_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_24821
Cluster HCCA: Cluster_104

Target Alias Description ECC score Gene Family Method Actions
Gb_31190 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 Archaeplastida
Solyc04g064660.1.1 No alias Pentatricopeptide repeat-containing protein At3g21470... 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 441 464
IPR002885 Pentatricopeptide_repeat 234 261
IPR002885 Pentatricopeptide_repeat 136 179
IPR002885 Pentatricopeptide_repeat 365 414
IPR002885 Pentatricopeptide_repeat 265 312
No external refs found!