1. Home
  2. Species
  3. Gingko biloba
  4. Sequence
  5. Gb_24825

Gb_24825


Description : Pentatricopeptide repeat-containing protein At2g22070 OS=Arabidopsis thaliana (sp|q9shz8|pp168_arath : 641.0)


Gene families : OG0003060 (Archaeplastida) Phylogenetic Tree(s): OG0003060_tree ,
OG_05_0021618 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0057625 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_24825
Cluster HCCA: Cluster_125

Target Alias Description ECC score Gene Family Method Actions
MA_10436610g0010 No alias Pentatricopeptide repeat-containing protein At1g26460,... 0.02 Archaeplastida
MA_408185g0010 No alias Pentatricopeptide repeat-containing protein At2g33760... 0.05 Archaeplastida
MA_956160g0010 No alias Pentatricopeptide repeat-containing protein At3g02330,... 0.03 Archaeplastida
Zm00001e010701_P001 No alias Pentatricopeptide repeat-containing protein At1g26460,... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 88 117
IPR032867 DYW_dom 662 786
IPR002885 Pentatricopeptide_repeat 221 268
IPR002885 Pentatricopeptide_repeat 121 167
IPR002885 Pentatricopeptide_repeat 489 536
IPR002885 Pentatricopeptide_repeat 388 435
IPR002885 Pentatricopeptide_repeat 289 334
IPR002885 Pentatricopeptide_repeat 564 587
No external refs found!