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  5. Gb_24913

Gb_24913


Description : Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum (sp|p10978|polx_tobac : 80.1)


Gene families : OG0001636 (Archaeplastida) Phylogenetic Tree(s): OG0001636_tree ,
OG_05_0001022 (LandPlants) Phylogenetic Tree(s): OG_05_0001022_tree ,
OG_06_0000515 (SeedPlants) Phylogenetic Tree(s): OG_06_0000515_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_24913
Cluster HCCA: Cluster_118

Target Alias Description ECC score Gene Family Method Actions
Gb_00584 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.09 Archaeplastida
Gb_01732 No alias no hits & (original description: none) 0.08 Archaeplastida
Gb_02240 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.06 Archaeplastida
Gb_05178 No alias no hits & (original description: none) 0.18 Archaeplastida
Gb_06493 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.08 Archaeplastida
Gb_06627 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.03 Archaeplastida
Gb_09166 No alias no hits & (original description: none) 0.06 Archaeplastida
Gb_12432 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.08 Archaeplastida
Gb_15515 No alias no hits & (original description: none) 0.2 Archaeplastida
Gb_17944 No alias no hits & (original description: none) 0.09 Archaeplastida
Gb_19243 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.06 Archaeplastida
Gb_19470 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.07 Archaeplastida
Gb_19601 No alias no hits & (original description: none) 0.11 Archaeplastida
Gb_26216 No alias no hits & (original description: none) 0.09 Archaeplastida
Gb_26792 No alias no hits & (original description: none) 0.09 Archaeplastida
Gb_27662 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.09 Archaeplastida
Gb_27706 No alias no hits & (original description: none) 0.07 Archaeplastida
Gb_28999 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.08 Archaeplastida
Gb_29655 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.09 Archaeplastida
Gb_31049 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.07 Archaeplastida
Gb_33290 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.06 Archaeplastida
Gb_33437 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.31 Archaeplastida
Gb_33668 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.09 Archaeplastida
Gb_37615 No alias no hits & (original description: none) 0.04 Archaeplastida
Gb_37743 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.09 Archaeplastida
Gb_38173 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.2 Archaeplastida
Gb_39190 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.06 Archaeplastida
Gb_39862 No alias Retrovirus-related Pol polyprotein from transposon TNT... 0.06 Archaeplastida
Gb_40231 No alias no hits & (original description: none) 0.09 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP Neighborhood
MF GO:0004519 endonuclease activity IEP Neighborhood
MF GO:0004521 endoribonuclease activity IEP Neighborhood
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Neighborhood
MF GO:0004540 ribonuclease activity IEP Neighborhood
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!