Gb_24980


Description : Methionine--tRNA ligase, chloroplastic/mitochondrial OS=Arabidopsis thaliana (sp|q9m2t9|symm_arath : 364.0)


Gene families : OG0004966 (Archaeplastida) Phylogenetic Tree(s): OG0004966_tree ,
OG_05_0007771 (LandPlants) Phylogenetic Tree(s): OG_05_0007771_tree ,
OG_06_0007336 (SeedPlants) Phylogenetic Tree(s): OG_06_0007336_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_24980
Cluster HCCA: Cluster_245

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00101170 evm_27.TU.AmTr_v1... Protein biosynthesis.aminoacyl-tRNA synthetase... 0.04 Archaeplastida
Cpa|evm.model.tig00000607.15 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.01 Archaeplastida
Cre12.g487100 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.03 Archaeplastida
GSVIVT01016575001 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.04 Archaeplastida
LOC_Os03g11120.1 No alias methionine-tRNA ligase 0.07 Archaeplastida
Mp2g16770.1 No alias methionine-tRNA ligase 0.03 Archaeplastida
Smo154280 No alias Protein biosynthesis.aminoacyl-tRNA synthetase... 0.04 Archaeplastida
Solyc05g054600.3.1 No alias methionine-tRNA ligase 0.07 Archaeplastida
Zm00001e000706_P004 No alias methionine-tRNA ligase 0.09 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA Interproscan
MF GO:0004812 aminoacyl-tRNA ligase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006418 tRNA aminoacylation for protein translation IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003916 DNA topoisomerase activity IEP Neighborhood
MF GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity IEP Neighborhood
MF GO:0004177 aminopeptidase activity IEP Neighborhood
MF GO:0004366 glycerol-3-phosphate O-acyltransferase activity IEP Neighborhood
MF GO:0004832 valine-tRNA ligase activity IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
BP GO:0006265 DNA topological change IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
BP GO:0006438 valyl-tRNA aminoacylation IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
MF GO:0008094 DNA-dependent ATPase activity IEP Neighborhood
MF GO:0008238 exopeptidase activity IEP Neighborhood
MF GO:0008374 O-acyltransferase activity IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
MF GO:0061505 DNA topoisomerase II activity IEP Neighborhood
BP GO:0071103 DNA conformation change IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
InterPro domains Description Start Stop
IPR015413 Methionyl/Leucyl_tRNA_Synth 1 89
IPR013155 M/V/L/I-tRNA-synth_anticd-bd 110 236
No external refs found!