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  5. Gb_25047

Gb_25047


Description : 50S ribosomal protein L2, chloroplastic OS=Cycas taitungensis (sp|a6h5m3|rk2_cycta : 217.0)


Gene families : OG0000693 (Archaeplastida) Phylogenetic Tree(s): OG0000693_tree ,
OG_05_0000458 (LandPlants) Phylogenetic Tree(s): OG_05_0000458_tree ,
OG_06_0000259 (SeedPlants) Phylogenetic Tree(s): OG_06_0000259_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_25047
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
ATCG00830 RPL2.1 ribosomal protein L2 0.03 Archaeplastida
ATCG01310 RPL2.2 ribosomal protein L2 0.03 Archaeplastida
Mp1g19370.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Smo137825 No alias Protein biosynthesis.organelle translation... 0.03 Archaeplastida
Solyc00g500035.1.1 No alias 50S ribosomal protein L2, chloroplastic OS=Nicotiana... 0.05 Archaeplastida
Solyc00g500036.1.1 No alias 50S ribosomal protein L2, chloroplastic OS=Nicotiana... 0.04 Archaeplastida
Solyc00g500047.1.1 No alias 50S ribosomal protein L2, chloroplastic OS=Solanum... 0.05 Archaeplastida
Solyc00g500079.1.1 No alias 50S ribosomal protein L2, chloroplastic OS=Nicotiana... 0.05 Archaeplastida
Solyc00g500080.1.1 No alias 50S ribosomal protein L2, chloroplastic OS=Nicotiana... 0.04 Archaeplastida
Solyc00g500297.1.1 No alias 50S ribosomal protein L2, chloroplastic OS=Nicotiana... 0.05 Archaeplastida
Solyc00g500298.1.1 No alias 50S ribosomal protein L2, chloroplastic OS=Nicotiana... 0.04 Archaeplastida
Solyc09g050067.1.1 No alias 50S ribosomal protein L2, chloroplastic OS=Nicotiana... 0.03 Archaeplastida
Solyc09g050068.1.1 No alias 50S ribosomal protein L2, chloroplastic OS=Solanum... 0.02 Archaeplastida
Solyc10g012217.1.1 No alias 50S ribosomal protein L2, chloroplastic OS=Nicotiana... 0.02 Archaeplastida
Solyc10g047090.2.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e015952_P001 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e018695_P001 No alias No annotation 0.02 Archaeplastida
Zm00001e022990_P001 No alias No annotation 0.02 Archaeplastida
Zm00001e024936_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e030112_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e042046_P001 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e042062_P001 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e042089_P001 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e042445_P001 No alias 50S ribosomal protein L2, chloroplastic OS=Sorghum... 0.02 Archaeplastida
Zm00001e042446_P001 No alias 50S ribosomal protein L2, chloroplastic OS=Sorghum... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006457 protein folding IEP Neighborhood
CC GO:0009521 photosystem IEP Neighborhood
BP GO:0009767 photosynthetic electron transport chain IEP Neighborhood
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Neighborhood
BP GO:0015986 ATP synthesis coupled proton transport IEP Neighborhood
MF GO:0016168 chlorophyll binding IEP Neighborhood
BP GO:0019684 photosynthesis, light reaction IEP Neighborhood
BP GO:0022900 electron transport chain IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
InterPro domains Description Start Stop
IPR022669 Ribosomal_L2_C 1 117
No external refs found!