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  5. Gb_25100

Gb_25100


Description : Pentatricopeptide repeat-containing protein At2g17140 OS=Arabidopsis thaliana (sp|q0wpz6|pp158_arath : 211.0)


Gene families : OG0009700 (Archaeplastida) Phylogenetic Tree(s): OG0009700_tree ,
OG_05_0009739 (LandPlants) Phylogenetic Tree(s): OG_05_0009739_tree ,
OG_06_0007391 (SeedPlants) Phylogenetic Tree(s): OG_06_0007391_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_25100
Cluster HCCA: Cluster_199


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 171 220
IPR002885 Pentatricopeptide_repeat 344 371
IPR002885 Pentatricopeptide_repeat 447 474
IPR002885 Pentatricopeptide_repeat 373 398
IPR002885 Pentatricopeptide_repeat 292 322
IPR002885 Pentatricopeptide_repeat 259 289
No external refs found!