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Gb_25190


Description : Tetraspanin-8 OS=Arabidopsis thaliana (sp|q8s8q6|tet8_arath : 307.0)


Gene families : OG0000259 (Archaeplastida) Phylogenetic Tree(s): OG0000259_tree ,
OG_05_0000226 (LandPlants) Phylogenetic Tree(s): OG_05_0000226_tree ,
OG_06_0000242 (SeedPlants) Phylogenetic Tree(s): OG_06_0000242_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_25190
Cluster HCCA: Cluster_87

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00136590 evm_27.TU.AmTr_v1... Tetraspanin-8 OS=Arabidopsis thaliana 0.03 Archaeplastida
AT2G23810 TET8 tetraspanin8 0.04 Archaeplastida
AT3G12090 TET6 tetraspanin6 0.04 Archaeplastida
AT4G23410 TET5 tetraspanin5 0.03 Archaeplastida
LOC_Os08g34460.1 No alias Tetraspanin-8 OS=Arabidopsis thaliana... 0.05 Archaeplastida
LOC_Os09g25760.1 No alias Tetraspanin-8 OS=Arabidopsis thaliana... 0.05 Archaeplastida
LOC_Os10g35980.1 No alias Tetraspanin-10 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_81058g0010 No alias Tetraspanin-8 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Solyc07g006280.3.1 No alias Tetraspanin-8 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc12g010570.1.1 No alias Tetraspanin-7 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e027586_P001 No alias Tetraspanin-3 OS=Arabidopsis thaliana... 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP Neighborhood
CC GO:0000813 ESCRT I complex IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
BP GO:0016052 carbohydrate catabolic process IEP Neighborhood
MF GO:0016160 amylase activity IEP Neighborhood
MF GO:0016161 beta-amylase activity IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
BP GO:0016197 endosomal transport IEP Neighborhood
BP GO:0032509 endosome transport via multivesicular body sorting pathway IEP Neighborhood
CC GO:0036452 ESCRT complex IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044440 endosomal part IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
BP GO:0071985 multivesicular body sorting pathway IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR018499 Tetraspanin/Peripherin 28 275
No external refs found!