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  5. Gb_25295

Gb_25295


Description : villin actin-crosslinking factor


Gene families : OG0000669 (Archaeplastida) Phylogenetic Tree(s): OG0000669_tree ,
OG_05_0000929 (LandPlants) Phylogenetic Tree(s): OG_05_0000929_tree ,
OG_06_0002995 (SeedPlants) Phylogenetic Tree(s): OG_06_0002995_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_25295
Cluster HCCA: Cluster_214

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00248490 evm_27.TU.AmTr_v1... Cytoskeleton.microfilament network.actin... 0.02 Archaeplastida
AT4G30160 VLN4, ATVLN4 villin 4 0.04 Archaeplastida
GSVIVT01029237001 No alias Cytoskeleton.microfilament network.actin... 0.03 Archaeplastida
GSVIVT01033261001 No alias Cytoskeleton.microfilament network.actin... 0.04 Archaeplastida
LOC_Os04g51440.1 No alias villin actin-crosslinking factor 0.02 Archaeplastida
LOC_Os06g44890.1 No alias villin actin-crosslinking factor 0.03 Archaeplastida
MA_10429481g0030 No alias villin actin-crosslinking factor 0.07 Archaeplastida
MA_10430359g0040 No alias villin actin-crosslinking factor 0.04 Archaeplastida
Mp1g24640.1 No alias villin actin-crosslinking factor 0.04 Archaeplastida
Pp3c18_7160V3.1 No alias villin 4 0.02 Archaeplastida
Pp3c19_16000V3.1 No alias villin 2 0.04 Archaeplastida
Solyc04g015830.3.1 No alias villin actin-crosslinking factor 0.05 Archaeplastida
Zm00001e001712_P002 No alias villin actin-crosslinking factor 0.04 Archaeplastida
Zm00001e007033_P001 No alias villin actin-crosslinking factor 0.02 Archaeplastida
Zm00001e010507_P006 No alias villin actin-crosslinking factor 0.03 Archaeplastida
Zm00001e018617_P001 No alias villin actin-crosslinking factor 0.02 Archaeplastida
Zm00001e038175_P001 No alias villin actin-crosslinking factor 0.04 Archaeplastida
Zm00001e041587_P002 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
BP GO:0005984 disaccharide metabolic process IEP Neighborhood
BP GO:0005991 trehalose metabolic process IEP Neighborhood
BP GO:0005992 trehalose biosynthetic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
MF GO:0008536 Ran GTPase binding IEP Neighborhood
BP GO:0009311 oligosaccharide metabolic process IEP Neighborhood
BP GO:0009312 oligosaccharide biosynthetic process IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
MF GO:0015078 proton transmembrane transporter activity IEP Neighborhood
MF GO:0015298 solute:cation antiporter activity IEP Neighborhood
MF GO:0015299 solute:proton antiporter activity IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
CC GO:0016459 myosin complex IEP Neighborhood
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046351 disaccharide biosynthetic process IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
InterPro domains Description Start Stop
IPR007123 Gelsolin-like_dom 29 110
IPR007123 Gelsolin-like_dom 150 217
IPR007123 Gelsolin-like_dom 410 483
IPR007123 Gelsolin-like_dom 271 338
No external refs found!