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  5. Gb_25302

Gb_25302


Description : no hits & (original description: none)


Gene families : OG0000041 (Archaeplastida) Phylogenetic Tree(s): OG0000041_tree ,
OG_05_0000046 (LandPlants) Phylogenetic Tree(s): OG_05_0000046_tree ,
OG_06_0002651 (SeedPlants) Phylogenetic Tree(s): OG_06_0002651_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_25302
Cluster HCCA: Cluster_316

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00250160 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AT1G68180 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT2G15580 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT3G46620 No alias zinc finger (C3HC4-type RING finger) family protein 0.05 Archaeplastida
AT3G51325 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT3G60080 No alias RING/U-box superfamily protein 0.03 Archaeplastida
Cpa|evm.model.tig00000158.69 No alias No description available 0.01 Archaeplastida
GSVIVT01022973001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
LOC_Os01g74040.1 No alias Probable E3 ubiquitin-protein ligase RHC2A... 0.02 Archaeplastida
LOC_Os02g49550.1 No alias E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum... 0.03 Archaeplastida
LOC_Os05g01940.1 No alias elicitor peptide precursor (proPEP) 0.03 Archaeplastida
LOC_Os05g41520.1 No alias Probable E3 ubiquitin-protein ligase RHC1A... 0.02 Archaeplastida
LOC_Os08g36170.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os11g37230.1 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10274793g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_433917g0010 No alias Probable E3 ubiquitin-protein ligase RHC1A... 0.03 Archaeplastida
Mp7g15970.1 No alias E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis... 0.02 Archaeplastida
Pp3c13_19370V3.1 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Solyc05g018050.1.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc06g005650.2.1 No alias E3 ubiquitin-protein ligase RDUF2 OS=Arabidopsis... 0.04 Archaeplastida
Solyc07g007180.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc12g008440.1.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e025483_P004 No alias E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp.... 0.02 Archaeplastida
Zm00001e027319_P001 No alias E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp.... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004556 alpha-amylase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
MF GO:0016160 amylase activity IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001841 Znf_RING 192 234
No external refs found!