AT2G38780


Description : unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 58 Blast hits to 58 proteins in 23 species: Archae - 0; Bacteria - 4; Metazoa - 1; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).


Gene families : OG0005187 (Archaeplastida) Phylogenetic Tree(s): OG0005187_tree ,
OG_05_0005284 (LandPlants) Phylogenetic Tree(s): OG_05_0005284_tree ,
OG_06_0005569 (SeedPlants) Phylogenetic Tree(s): OG_06_0005569_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G38780

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00160p00077470 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
GSVIVT01000839001 No alias No description available 0.03 Archaeplastida
Solyc01g068470.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e026859_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
BP GO:0008150 biological_process ND Interproscan
CC GO:0009507 chloroplast ISM Interproscan
Type GO Term Name Evidence Source
MF GO:0003954 NADH dehydrogenase activity IEP Neighborhood
MF GO:0004856 xylulokinase activity IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006720 isoprenoid metabolic process IEP Neighborhood
BP GO:0006787 porphyrin-containing compound catabolic process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0008299 isoprenoid biosynthetic process IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
CC GO:0009295 nucleoid IEP Neighborhood
MF GO:0009975 cyclase activity IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0010155 regulation of proton transport IEP Neighborhood
CC GO:0010287 plastoglobule IEP Neighborhood
BP GO:0015996 chlorophyll catabolic process IEP Neighborhood
BP GO:0016119 carotene metabolic process IEP Neighborhood
BP GO:0016120 carotene biosynthetic process IEP Neighborhood
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Neighborhood
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Neighborhood
MF GO:0016860 intramolecular oxidoreductase activity IEP Neighborhood
BP GO:0017001 antibiotic catabolic process IEP Neighborhood
MF GO:0019104 DNA N-glycosylase activity IEP Neighborhood
MF GO:0019200 carbohydrate kinase activity IEP Neighborhood
BP GO:0019374 galactolipid metabolic process IEP Neighborhood
BP GO:0019375 galactolipid biosynthetic process IEP Neighborhood
CC GO:0031300 intrinsic component of organelle membrane IEP Neighborhood
CC GO:0031304 intrinsic component of mitochondrial inner membrane IEP Neighborhood
BP GO:0033015 tetrapyrrole catabolic process IEP Neighborhood
BP GO:0042214 terpene metabolic process IEP Neighborhood
BP GO:0042440 pigment metabolic process IEP Neighborhood
CC GO:0042644 chloroplast nucleoid IEP Neighborhood
CC GO:0042646 plastid nucleoid IEP Neighborhood
BP GO:0042744 hydrogen peroxide catabolic process IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044434 chloroplast part IEP Neighborhood
CC GO:0044435 plastid part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
MF GO:0045436 lycopene beta cyclase activity IEP Neighborhood
BP GO:0046149 pigment catabolic process IEP Neighborhood
BP GO:0046246 terpene biosynthetic process IEP Neighborhood
BP GO:0051187 cofactor catabolic process IEP Neighborhood
BP GO:0080183 response to photooxidative stress IEP Neighborhood
CC GO:0098573 intrinsic component of mitochondrial membrane IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
BP GO:1904062 regulation of cation transmembrane transport IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!