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  5. AT2G38905

AT2G38905


Description : Low temperature and salt responsive protein family


Gene families : OG0000777 (Archaeplastida) Phylogenetic Tree(s): OG0000777_tree ,
OG_05_0000541 (LandPlants) Phylogenetic Tree(s): OG_05_0000541_tree ,
OG_06_0000974 (SeedPlants) Phylogenetic Tree(s): OG_06_0000974_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G38905
Cluster HCCA: Cluster_83

Target Alias Description ECC score Gene Family Method Actions
MA_12178g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp1g23330.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp4g20350.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc07g005715.1.1 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0009409 response to cold ISS Interproscan
BP GO:0042538 hyperosmotic salinity response ISS Interproscan
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Type GO Term Name Evidence Source
MF GO:0004356 glutamate-ammonia ligase activity IEP Neighborhood
MF GO:0004396 hexokinase activity IEP Neighborhood
MF GO:0004448 isocitrate dehydrogenase activity IEP Neighborhood
MF GO:0004449 isocitrate dehydrogenase (NAD+) activity IEP Neighborhood
MF GO:0005337 nucleoside transmembrane transporter activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
CC GO:0005795 Golgi stack IEP Neighborhood
BP GO:0006099 tricarboxylic acid cycle IEP Neighborhood
BP GO:0006101 citrate metabolic process IEP Neighborhood
BP GO:0006102 isocitrate metabolic process IEP Neighborhood
MF GO:0008417 fucosyltransferase activity IEP Neighborhood
MF GO:0008514 organic anion transmembrane transporter activity IEP Neighborhood
MF GO:0008565 protein transporter activity IEP Neighborhood
BP GO:0009664 plant-type cell wall organization IEP Neighborhood
BP GO:0010208 pollen wall assembly IEP Neighborhood
BP GO:0010584 pollen exine formation IEP Neighborhood
BP GO:0010927 cellular component assembly involved in morphogenesis IEP Neighborhood
MF GO:0015172 acidic amino acid transmembrane transporter activity IEP Neighborhood
MF GO:0015175 neutral amino acid transmembrane transporter activity IEP Neighborhood
MF GO:0016211 ammonia ligase activity IEP Neighborhood
BP GO:0016226 iron-sulfur cluster assembly IEP Neighborhood
CC GO:0016459 myosin complex IEP Neighborhood
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
BP GO:0031163 metallo-sulfur cluster assembly IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
BP GO:0043622 cortical microtubule organization IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
BP GO:0048646 anatomical structure formation involved in morphogenesis IEP Neighborhood
BP GO:0060211 regulation of nuclear-transcribed mRNA poly(A) tail shortening IEP Neighborhood
BP GO:0061013 regulation of mRNA catabolic process IEP Neighborhood
BP GO:1900151 regulation of nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay IEP Neighborhood
BP GO:1903311 regulation of mRNA metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000612 PMP3 6 53
No external refs found!