AT2G38920

Description : SPX (SYG1/Pho81/XPR1) domain-containing protein / zinc finger (C3HC4-type RING finger) protein-related

Gene families : OG0001855 (Archaeplastida) Phylogenetic Tree(s): OG0001855_tree ,
OG_05_0001955 (LandPlants) Phylogenetic Tree(s): OG_05_0001955_tree ,
OG_06_0003658 (SeedPlants) Phylogenetic Tree(s): OG_06_0003658_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G38920
Cluster	HCCA: Cluster_60

Target	Alias	Description	ECC score	Gene Family Method	Actions
GSVIVT01027992001	No alias	Probable E3 ubiquitin-protein ligase BAH1-like 1...	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006631	fatty acid metabolic process	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	ion transport	None	Extended
BP	GO:0006817	phosphate ion transport	RCA	Interproscan
BP	GO:0006820	anion transport	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0007154	cell communication	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009062	fatty acid catabolic process	RCA	Interproscan
BP	GO:0009267	cellular response to starvation	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0009991	response to extracellular stimulus	None	Extended
BP	GO:0015698	inorganic anion transport	None	Extended
BP	GO:0016036	cellular response to phosphate starvation	RCA	Interproscan
BP	GO:0016042	lipid catabolic process	None	Extended
BP	GO:0016054	organic acid catabolic process	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0031667	response to nutrient levels	None	Extended
BP	GO:0031668	cellular response to extracellular stimulus	None	Extended
BP	GO:0031669	cellular response to nutrient levels	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0042594	response to starvation	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044242	cellular lipid catabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044282	small molecule catabolic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0046395	carboxylic acid catabolic process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0071496	cellular response to external stimulus	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072329	monocarboxylic acid catabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000041	transition metal ion transport	IEP	Neighborhood
BP	GO:0001666	response to hypoxia	IEP	Neighborhood
BP	GO:0001708	cell fate specification	IEP	Neighborhood
BP	GO:0006643	membrane lipid metabolic process	IEP	Neighborhood
BP	GO:0006664	glycolipid metabolic process	IEP	Neighborhood
BP	GO:0006826	iron ion transport	IEP	Neighborhood
BP	GO:0006833	water transport	IEP	Neighborhood
BP	GO:0006863	purine nucleobase transport	IEP	Neighborhood
BP	GO:0009225	nucleotide-sugar metabolic process	IEP	Neighborhood
BP	GO:0009247	glycolipid biosynthetic process	IEP	Neighborhood
BP	GO:0009744	response to sucrose	IEP	Neighborhood
BP	GO:0009746	response to hexose	IEP	Neighborhood
BP	GO:0009749	response to glucose	IEP	Neighborhood
BP	GO:0009750	response to fructose	IEP	Neighborhood
BP	GO:0010106	cellular response to iron ion starvation	IEP	Neighborhood
BP	GO:0015851	nucleobase transport	IEP	Neighborhood
MF	GO:0016830	carbon-carbon lyase activity	IEP	Neighborhood
MF	GO:0016831	carboxy-lyase activity	IEP	Neighborhood
BP	GO:0019321	pentose metabolic process	IEP	Neighborhood
BP	GO:0019374	galactolipid metabolic process	IEP	Neighborhood
BP	GO:0019375	galactolipid biosynthetic process	IEP	Neighborhood
BP	GO:0034284	response to monosaccharide	IEP	Neighborhood
BP	GO:0034285	response to disaccharide	IEP	Neighborhood
BP	GO:0036293	response to decreased oxygen levels	IEP	Neighborhood
BP	GO:0042044	fluid transport	IEP	Neighborhood
BP	GO:0042732	D-xylose metabolic process	IEP	Neighborhood
BP	GO:0046467	membrane lipid biosynthetic process	IEP	Neighborhood
MF	GO:0046873	metal ion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0048040	UDP-glucuronate decarboxylase activity	IEP	Neighborhood
BP	GO:0070482	response to oxygen levels	IEP	Neighborhood
BP	GO:1901135	carbohydrate derivative metabolic process	IEP	Neighborhood
BP	GO:1903509	liposaccharide metabolic process	IEP	Neighborhood

No InterPro domains available for this sequence

External Links

No external refs found!

AT2G38920

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation