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  5. Gb_25539

Gb_25539


Description : Cleavage and polyadenylation specificity factor subunit 1 OS=Arabidopsis thaliana (sp|q9fgr0|cpsf1_arath : 88.6)


Gene families : OG0003000 (Archaeplastida) Phylogenetic Tree(s): OG0003000_tree ,
OG_05_0058922 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0052022 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_25539
Cluster HCCA: Cluster_318

Target Alias Description ECC score Gene Family Method Actions
Cre13.g573450 No alias Probable cleavage and polyadenylation specificity factor... 0.01 Archaeplastida
MA_9146756g0010 No alias Cleavage and polyadenylation specificity factor subunit... 0.02 Archaeplastida
Pp3c11_8810V3.1 No alias cleavage and polyadenylation specificity factor 160 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004470 malic enzyme activity IEP Neighborhood
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
MF GO:0008536 Ran GTPase binding IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Neighborhood
MF GO:0016615 malate dehydrogenase activity IEP Neighborhood
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!