1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT2G39050

AT2G39050


Description : hydroxyproline-rich glycoprotein family protein


Gene families : OG0000702 (Archaeplastida) Phylogenetic Tree(s): OG0000702_tree ,
OG_05_0000468 (LandPlants) Phylogenetic Tree(s): OG_05_0000468_tree ,
OG_06_0000426 (SeedPlants) Phylogenetic Tree(s): OG_06_0000426_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G39050
Cluster HCCA: Cluster_208

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g01450.1 No alias Ricin B-like lectin R40C1 OS=Oryza sativa subsp.... 0.04 Archaeplastida
LOC_Os07g48460.1 No alias Ricin B-like lectin R40G2 OS=Oryza sativa subsp.... 0.07 Archaeplastida
Smo437633 No alias Ricin B-like lectin R40G3 OS=Oryza sativa subsp. japonica 0.03 Archaeplastida
Zm00001e017165_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e035882_P001 No alias Ricin B-like lectin R40G3 OS=Oryza sativa subsp.... 0.06 Archaeplastida
Zm00001e035883_P001 No alias Ricin B-like lectin R40G3 OS=Oryza sativa subsp.... 0.07 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IDA Interproscan
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005737 cytoplasm IDA Interproscan
BP GO:0008150 biological_process ND Interproscan
MF GO:0030246 carbohydrate binding IDA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000303 response to superoxide IEP Neighborhood
BP GO:0000305 response to oxygen radical IEP Neighborhood
BP GO:0000578 embryonic axis specification IEP Neighborhood
BP GO:0001101 response to acid chemical IEP Neighborhood
BP GO:0002682 regulation of immune system process IEP Neighborhood
BP GO:0002831 regulation of response to biotic stimulus IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003840 obsolete gamma-glutamyltransferase activity IEP Neighborhood
MF GO:0004664 prephenate dehydratase activity IEP Neighborhood
MF GO:0004721 phosphoprotein phosphatase activity IEP Neighborhood
MF GO:0004722 protein serine/threonine phosphatase activity IEP Neighborhood
CC GO:0005886 plasma membrane IEP Neighborhood
CC GO:0005911 cell-cell junction IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006109 regulation of carbohydrate metabolic process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006470 protein dephosphorylation IEP Neighborhood
BP GO:0006558 L-phenylalanine metabolic process IEP Neighborhood
BP GO:0006576 cellular biogenic amine metabolic process IEP Neighborhood
BP GO:0006595 polyamine metabolic process IEP Neighborhood
BP GO:0006598 polyamine catabolic process IEP Neighborhood
BP GO:0006605 protein targeting IEP Neighborhood
BP GO:0006623 protein targeting to vacuole IEP Neighborhood
BP GO:0006749 glutathione metabolic process IEP Neighborhood
BP GO:0006751 glutathione catabolic process IEP Neighborhood
BP GO:0006805 xenobiotic metabolic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0006914 autophagy IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006970 response to osmotic stress IEP Neighborhood
BP GO:0006972 hyperosmotic response IEP Neighborhood
BP GO:0007034 vacuolar transport IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
MF GO:0008131 primary amine oxidase activity IEP Neighborhood
CC GO:0008287 protein serine/threonine phosphatase complex IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0009072 aromatic amino acid family metabolic process IEP Neighborhood
BP GO:0009094 L-phenylalanine biosynthetic process IEP Neighborhood
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Neighborhood
BP GO:0009266 response to temperature stimulus IEP Neighborhood
BP GO:0009268 response to pH IEP Neighborhood
BP GO:0009308 amine metabolic process IEP Neighborhood
BP GO:0009310 amine catabolic process IEP Neighborhood
BP GO:0009409 response to cold IEP Neighborhood
BP GO:0009414 response to water deprivation IEP Neighborhood
BP GO:0009415 response to water IEP Neighborhood
CC GO:0009506 plasmodesma IEP Neighborhood
BP GO:0009605 response to external stimulus IEP Neighborhood
BP GO:0009607 response to biotic stimulus IEP Neighborhood
BP GO:0009611 response to wounding IEP Neighborhood
BP GO:0009620 response to fungus IEP Neighborhood
BP GO:0009628 response to abiotic stimulus IEP Neighborhood
BP GO:0009651 response to salt stress IEP Neighborhood
BP GO:0009694 jasmonic acid metabolic process IEP Neighborhood
BP GO:0009695 jasmonic acid biosynthetic process IEP Neighborhood
BP GO:0009698 phenylpropanoid metabolic process IEP Neighborhood
BP GO:0009699 phenylpropanoid biosynthetic process IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009723 response to ethylene IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
BP GO:0009737 response to abscisic acid IEP Neighborhood
BP GO:0009738 abscisic acid-activated signaling pathway IEP Neighborhood
BP GO:0009753 response to jasmonic acid IEP Neighborhood
BP GO:0009755 hormone-mediated signaling pathway IEP Neighborhood
BP GO:0009787 regulation of abscisic acid-activated signaling pathway IEP Neighborhood
BP GO:0009788 negative regulation of abscisic acid-activated signaling pathway IEP Neighborhood
BP GO:0009798 axis specification IEP Neighborhood
BP GO:0009804 coumarin metabolic process IEP Neighborhood
BP GO:0009805 coumarin biosynthetic process IEP Neighborhood
MF GO:0009815 1-aminocyclopropane-1-carboxylate oxidase activity IEP Neighborhood
BP GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway IEP Neighborhood
BP GO:0009863 salicylic acid mediated signaling pathway IEP Neighborhood
BP GO:0009867 jasmonic acid mediated signaling pathway IEP Neighborhood
BP GO:0009966 regulation of signal transduction IEP Neighborhood
BP GO:0009968 negative regulation of signal transduction IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
BP GO:0010035 response to inorganic substance IEP Neighborhood
BP GO:0010112 regulation of systemic acquired resistance IEP Neighborhood
BP GO:0010118 stomatal movement IEP Neighborhood
BP GO:0010119 regulation of stomatal movement IEP Neighborhood
BP GO:0010188 response to microbial phytotoxin IEP Neighborhood
BP GO:0010439 regulation of glucosinolate biosynthetic process IEP Neighborhood
BP GO:0010646 regulation of cell communication IEP Neighborhood
BP GO:0010648 negative regulation of cell communication IEP Neighborhood
BP GO:0010675 regulation of cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
MF GO:0015385 sodium:proton antiporter activity IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
BP GO:0016053 organic acid biosynthetic process IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
BP GO:0016197 endosomal transport IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Neighborhood
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Neighborhood
MF GO:0016647 oxidoreductase activity, acting on the CH-NH group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016755 transferase activity, transferring amino-acyl groups IEP Neighborhood
MF GO:0016756 glutathione gamma-glutamylcysteinyltransferase activity IEP Neighborhood
MF GO:0016791 phosphatase activity IEP Neighborhood
BP GO:0019748 secondary metabolic process IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
MF GO:0019900 kinase binding IEP Neighborhood
MF GO:0019901 protein kinase binding IEP Neighborhood
BP GO:0023051 regulation of signaling IEP Neighborhood
BP GO:0023057 negative regulation of signaling IEP Neighborhood
CC GO:0030054 cell junction IEP Neighborhood
BP GO:0031347 regulation of defense response IEP Neighborhood
BP GO:0032101 regulation of response to external stimulus IEP Neighborhood
BP GO:0032509 endosome transport via multivesicular body sorting pathway IEP Neighborhood
BP GO:0032787 monocarboxylic acid metabolic process IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
CC GO:0033106 cis-Golgi network membrane IEP Neighborhood
BP GO:0033365 protein localization to organelle IEP Neighborhood
BP GO:0033993 response to lipid IEP Neighborhood
BP GO:0034613 cellular protein localization IEP Neighborhood
BP GO:0042219 cellular modified amino acid catabolic process IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
BP GO:0042402 cellular biogenic amine catabolic process IEP Neighborhood
BP GO:0042538 hyperosmotic salinity response IEP Neighborhood
BP GO:0042762 regulation of sulfur metabolic process IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
BP GO:0043069 negative regulation of programmed cell death IEP Neighborhood
BP GO:0043171 peptide catabolic process IEP Neighborhood
BP GO:0043207 response to external biotic stimulus IEP Neighborhood
BP GO:0043255 regulation of carbohydrate biosynthetic process IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
BP GO:0043455 regulation of secondary metabolic process IEP Neighborhood
BP GO:0044106 cellular amine metabolic process IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
BP GO:0044273 sulfur compound catabolic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
BP GO:0044283 small molecule biosynthetic process IEP Neighborhood
BP GO:0044550 secondary metabolite biosynthetic process IEP Neighborhood
BP GO:0045088 regulation of innate immune response IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046394 carboxylic acid biosynthetic process IEP Neighborhood
BP GO:0046482 para-aminobenzoic acid metabolic process IEP Neighborhood
MF GO:0046592 polyamine oxidase activity IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
MF GO:0047769 arogenate dehydratase activity IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
BP GO:0048583 regulation of response to stimulus IEP Neighborhood
BP GO:0050776 regulation of immune response IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051187 cofactor catabolic process IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
BP GO:0051704 multi-organism process IEP Neighborhood
BP GO:0051707 response to other organism IEP Neighborhood
BP GO:0055067 monovalent inorganic cation homeostasis IEP Neighborhood
BP GO:0055075 potassium ion homeostasis IEP Neighborhood
BP GO:0060548 negative regulation of cell death IEP Neighborhood
BP GO:0061919 process utilizing autophagic mechanism IEP Neighborhood
BP GO:0070727 cellular macromolecule localization IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
BP GO:0071985 multivesicular body sorting pathway IEP Neighborhood
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood
BP GO:0072594 establishment of protein localization to organelle IEP Neighborhood
BP GO:0072665 protein localization to vacuole IEP Neighborhood
BP GO:0072666 establishment of protein localization to vacuole IEP Neighborhood
BP GO:0080134 regulation of response to stress IEP Neighborhood
BP GO:0090333 regulation of stomatal closure IEP Neighborhood
BP GO:0097305 response to alcohol IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
BP GO:1900376 regulation of secondary metabolite biosynthetic process IEP Neighborhood
BP GO:1901419 regulation of response to alcohol IEP Neighborhood
BP GO:1901420 negative regulation of response to alcohol IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1901565 organonitrogen compound catabolic process IEP Neighborhood
BP GO:1901575 organic substance catabolic process IEP Neighborhood
BP GO:1901700 response to oxygen-containing compound IEP Neighborhood
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Neighborhood
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Neighborhood
CC GO:1903293 phosphatase complex IEP Neighborhood
BP GO:1905957 regulation of cellular response to alcohol IEP Neighborhood
BP GO:1905958 negative regulation of cellular response to alcohol IEP Neighborhood
BP GO:2000022 regulation of jasmonic acid mediated signaling pathway IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!