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  5. Gb_25685

Gb_25685


Description : C2H2 zinc finger transcription factor


Gene families : OG0000055 (Archaeplastida) Phylogenetic Tree(s): OG0000055_tree ,
OG_05_0000021 (LandPlants) Phylogenetic Tree(s): OG_05_0000021_tree ,
OG_06_0050417 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_25685
Cluster HCCA: Cluster_103

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00149p00097070 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
AT1G24625 ZFP7 zinc finger protein 7 0.04 Archaeplastida
AT3G09290 TAC1 telomerase activator1 0.02 Archaeplastida
AT5G27880 No alias C2H2 and C2HC zinc fingers superfamily protein 0.02 Archaeplastida
GSVIVT01011868001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
GSVIVT01027720001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
GSVIVT01031007001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 Archaeplastida
Gb_07777 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
LOC_Os01g04120.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
LOC_Os02g08510.1 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
LOC_Os02g57550.1 No alias C2H2 zinc finger transcription factor 0.08 Archaeplastida
LOC_Os03g05490.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os04g50070.1 No alias C2H2 zinc finger transcription factor 0.07 Archaeplastida
LOC_Os05g14130.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os07g23450.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc09g011120.1.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e008019_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e034219_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e034220_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e034221_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e037944_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006952 defense response IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!