1. Home
  2. Species
  3. Gingko biloba
  4. Sequence
  5. Gb_25799

Gb_25799


Description : Putative disease resistance protein RGA3 OS=Solanum bulbocastanum (sp|q7xa40|rga3_solbu : 273.0)


Gene families : OG0000088 (Archaeplastida) Phylogenetic Tree(s): OG0000088_tree ,
OG_05_0000027 (LandPlants) Phylogenetic Tree(s): OG_05_0000027_tree ,
OG_06_0000258 (SeedPlants) Phylogenetic Tree(s): OG_06_0000258_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Gb_25799
Cluster HCCA: Cluster_233

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00088p00057720 evm_27.TU.AmTr_v1... Disease resistance protein RPM1 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00090p00088070 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AT1G59780 No alias NB-ARC domain-containing disease resistance protein 0.03 Archaeplastida
AT3G46710 No alias NB-ARC domain-containing disease resistance protein 0.03 Archaeplastida
Gb_01300 No alias Putative disease resistance protein RGA3 OS=Solanum... 0.02 Archaeplastida
Gb_25815 No alias Putative disease resistance protein RGA3 OS=Solanum... 0.02 Archaeplastida
MA_10429865g0010 No alias Disease resistance RPP13-like protein 4 OS=Arabidopsis... 0.01 Archaeplastida
MA_10432037g0020 No alias Putative disease resistance protein RGA4 OS=Solanum... 0.01 Archaeplastida
MA_193082g0010 No alias Disease resistance RPP13-like protein 4 OS=Arabidopsis... 0.02 Archaeplastida
MA_41013g0010 No alias Disease resistance RPP13-like protein 4 OS=Arabidopsis... 0.01 Archaeplastida
MA_6828207g0010 No alias no hits & (original description: none) 0.01 Archaeplastida
Solyc04g009240.2.1 No alias Disease resistance protein RPP13 OS=Arabidopsis thaliana... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0043531 ADP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Neighborhood
MF GO:0004356 glutamate-ammonia ligase activity IEP Neighborhood
MF GO:0004478 methionine adenosyltransferase activity IEP Neighborhood
MF GO:0004527 exonuclease activity IEP Neighborhood
MF GO:0005319 lipid transporter activity IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
MF GO:0005544 calcium-dependent phospholipid binding IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006520 cellular amino acid metabolic process IEP Neighborhood
BP GO:0006541 glutamine metabolic process IEP Neighborhood
BP GO:0006542 glutamine biosynthetic process IEP Neighborhood
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP Neighborhood
BP GO:0006869 lipid transport IEP Neighborhood
BP GO:0007034 vacuolar transport IEP Neighborhood
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
MF GO:0008408 3'-5' exonuclease activity IEP Neighborhood
BP GO:0009064 glutamine family amino acid metabolic process IEP Neighborhood
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Neighborhood
MF GO:0016211 ammonia ligase activity IEP Neighborhood
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Neighborhood
MF GO:0016830 carbon-carbon lyase activity IEP Neighborhood
MF GO:0016831 carboxy-lyase activity IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
MF GO:0019842 vitamin binding IEP Neighborhood
MF GO:0030170 pyridoxal phosphate binding IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
BP GO:0046500 S-adenosylmethionine metabolic process IEP Neighborhood
BP GO:0061024 membrane organization IEP Neighborhood
MF GO:0070279 vitamin B6 binding IEP Neighborhood
BP GO:0120009 intermembrane lipid transfer IEP Neighborhood
MF GO:0120013 intermembrane lipid transfer activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 514 574
IPR002182 NB-ARC 135 372
No external refs found!